miSRA: search preprocessed public small-RNA data against your reference sequences (miRNA, tRNA, etc)
ugr
miSRAdb automatic annotations
Experiments, taxonID and sample tag are searchable fields
Name Exp Study TaxonID SampleTag SampleTag2 LibraryInf Disease Method
Homo sapiens DRX037331 DRP001151 9606 NA cell_line: COBL-a Illumina NA library_protocol: OP-SOLEXA-shortRNA-TruSeq-v2.0
Homo sapiens DRX037330 DRP001151 9606 NA cell_line: COBL-a Illumina NA library_protocol: OP-SOLEXA-shortRNA-TruSeq-v2.0
Rattus norvegicus SRX4733519 SRP162464 10116 Sperm tissue: Sperm adapter_trimmed NA NA
Rattus norvegicus SRX4733518 SRP162464 10116 Sperm tissue: Sperm adapter_trimmed NA NA
Homo sapiens DRX037335 DRP001151 9606 NA cell_line: COBL-a Illumina NA NA
Homo sapiens DRX037334 DRP001151 9606 NA cell_line: COBL-a Illumina NA library_protocol: OP-SOLEXA-shortRNA-TruSeq-v2.0
Homo sapiens DRX037333 DRP001151 9606 NA cell_line: COBL-a Illumina NA library_protocol: OP-SOLEXA-shortRNA-TruSeq-v2.0
Homo sapiens DRX037332 DRP001151 9606 NA cell_line: COBL-a Illumina NA library_protocol: OP-SOLEXA-shortRNA-TruSeq-v2.0
Homo sapiens DRX037339 DRP001151 9606 spinal cord rna_sample_type: total RNA Illumina NA rna_extraction_protocol: OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
Homo sapiens SRX7622971 SRP244267 9606 Serum tissue: Serum NEB 39.285714285714285 NA
Homo sapiens DRX037338 DRP001151 9606 unclassifiable rna_sample_type: total RNA Illumina normal rna_extraction_protocol: OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0
Homo sapiens SRX7622970 SRP244267 9606 Serum tissue: Serum NEB 31.857142857142858 NA
Homo sapiens DRX037337 DRP001151 9606 unclassifiable rna_sample_type: total RNA Illumina normal rna_extraction_protocol: OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0
Homo sapiens DRX037336 DRP001151 9606 unclassifiable rna_sample_type: total RNA Illumina normal rna_extraction_protocol: OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0
Rattus norvegicus SRX4733520 SRP162464 10116 Sperm tissue: Sperm adapter_trimmed NA NA
Homo sapiens SRX7622969 SRP244267 9606 Serum tissue: Serum Illumina_2 56 NA
Homo sapiens SRX7622968 SRP244267 9606 Serum tissue: Serum Illumina_2 20.714285714285715 NA
Homo sapiens SRX7622967 SRP244267 9606 Serum tissue: Serum NEB 16 NA
Homo sapiens SRX7622966 SRP244267 9606 Serum tissue: Serum Illumina_2 0.7142857142857143 NA
Homo sapiens SRX7622965 SRP244267 9606 Serum tissue: Serum NEB 48 NA
Rattus norvegicus SRX4733528 SRP162464 10116 Sperm tissue: Sperm adapter_trimmed NA NA
Rattus norvegicus SRX4733527 SRP162464 10116 Sperm tissue: Sperm adapter_trimmed NA NA
Rattus norvegicus SRX4733526 SRP162464 10116 Sperm tissue: Sperm adapter_trimmed NA NA
Rattus norvegicus SRX4733525 SRP162464 10116 Sperm tissue: Sperm adapter_trimmed NA NA
Rattus norvegicus SRX4733524 SRP162464 10116 Sperm tissue: Sperm adapter_trimmed NA NA