miSRA: search preprocessed public small-RNA data against your reference sequences (miRNA, tRNA, etc)
ugr
miSRAdb automatic annotations
Experiments, taxonID and sample tag are searchable fields
Name Exp Study TaxonID SampleTag SampleTag2 LibraryInf Disease Method
Homo sapiens SRX23957672 SRP495402 9606 blood serum tissue: blood serum Qiagen_UMI NA sequencing batch: 1
Homo sapiens SRX23957679 SRP495402 9606 blood serum tissue: blood serum Qiagen_UMI NA sequencing batch: 2
Arabidopsis thaliana SRX7050411 SRP226805 3702 whole seedling cell_line: not applicable adapter_trimmed not applicable growth_protocol: Sterilized seeds were suspended in 0.1% agarose and plated on MS medium. Plates were grown at a tissue culture room for 10 days under a 16-h-light/8-h-dark photoperiod.
Homo sapiens SRX23957678 SRP495402 9606 blood serum tissue: blood serum Qiagen_UMI NA sequencing batch: 2
Homo sapiens SRX23957677 SRP495402 9606 blood serum tissue: blood serum Qiagen_UMI NA sequencing batch: 1
Homo sapiens SRX23957676 SRP495402 9606 blood serum tissue: blood serum Qiagen_UMI NA sequencing batch: 3
Homo sapiens DRX037302 DRP001151 9606 breast tissue_type: breast Illumina NA library_protocol: OP-SOLEXA-shortRNA-TruSeq-v2.0
Homo sapiens DRX037301 DRP001151 9606 breast tissue_type: breast Illumina NA library_protocol: OP-SOLEXA-shortRNA-TruSeq-v2.0
Arabidopsis thaliana SRX7050414 SRP226805 3702 whole seedling cell_line: not applicable adapter_trimmed not applicable growth_protocol: Sterilized seeds were suspended in 0.1% agarose and plated on MS medium in which the sulfate-containing salts were replaced with equivalent amounts of chloride salts. Plates were grown at a tissue culture room for 10 days under a 16-h-light/8-h-dark photoperiod.
Homo sapiens DRX037300 DRP001151 9606 breast tissue_type: breast Illumina NA library_protocol: OP-SOLEXA-shortRNA-TruSeq-v2.0
Arabidopsis thaliana SRX7050413 SRP226805 3702 whole seedling cell_line: not applicable adapter_trimmed not applicable growth_protocol: Sterilized seeds were suspended in 0.1% agarose and plated on MS medium in which ammonium nitrate was removed and potassium nitrate was replaced with equivalent amounts of potassium chloride. Plates were grown at a tissue culture room for 10 days under a 16-h-light/8-h-dark photoperiod.
Arabidopsis thaliana SRX7050412 SRP226805 3702 whole seedling cell_line: not applicable adapter_trimmed not applicable growth_protocol: Sterilized seeds were suspended in 0.1% agarose and plated on MS medium without the addition of sucrose. Plates were grown at a tissue culture room for 10 days under a 16-h-light/8-h-dark photoperiod.
Homo sapiens DRX037306 DRP001151 9606 breast tissue_type: breast Illumina NA NA
Homo sapiens DRX037305 DRP001151 9606 breast tissue_type: breast Illumina NA library_protocol: OP-SOLEXA-shortRNA-TruSeq-v2.0
Homo sapiens DRX037304 DRP001151 9606 breast tissue_type: breast Illumina NA library_protocol: OP-SOLEXA-shortRNA-TruSeq-v2.0
Homo sapiens DRX037303 DRP001151 9606 breast tissue_type: breast Illumina NA NA
Homo sapiens DRX037309 DRP001151 9606 breast tissue_type: breast Illumina NA library_protocol: OP-SOLEXA-shortRNA-TruSeq-v2.0
Homo sapiens SRX18491329 SRP411341 9606 Blood tissue: Blood NEB COVID-19 NA
Homo sapiens DRX037308 DRP001151 9606 breast tissue_type: breast Illumina NA library_protocol: OP-SOLEXA-shortRNA-TruSeq-v2.0
Homo sapiens SRX18491328 SRP411341 9606 Blood tissue: Blood NEB COVID-19 NA
Homo sapiens DRX037307 DRP001151 9606 breast tissue_type: breast Illumina NA library_protocol: OP-SOLEXA-shortRNA-TruSeq-v2.0
Homo sapiens SRX18491327 SRP411341 9606 Blood tissue: Blood NEB COVID-19 NA
Homo sapiens SRX18491326 SRP411341 9606 Blood tissue: Blood NEB COVID-19 NA
Homo sapiens SRX18491325 SRP411341 9606 Blood tissue: Blood NEB COVID-19 NA
Homo sapiens SRX18491324 SRP411341 9606 Blood tissue: Blood NEB COVID-19 NA