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miSRA: search preprocessed public small-RNA data against your reference sequences (miRNA, tRNA, etc)
ugr
miSRAdb automatic annotations
Experiments, taxonID and sample tag are searchable fields
Name Exp Study TaxonID SampleTag SampleTag2 LibraryInf Disease Method
Homo sapiens SRX2839068 SRP107326 9606 colon phenotype: adjacent normal adapter_trimmed colorectal cancer NA
Drosophila melanogaster SRX10238593 SRP309293 7227 sperm tissue: sperm NEB NA breeding_method: Flies were maintained on standard-diet at 25C. 0-4 days old flies were manually sorted to 15 males and 15 females per vial (or 45+45 in bottles) and allowed to lay eggs for 4 days. Flies were crossed on Thursday, flipped on Monday and virgins collected the following Monday. On Thursday flies were crossed again establishing a 2-week generation cycle. Genetic background was equalized between mutant and WT strains by crossing the mutant lines over double balancer lines where chromosomes were followed with a visible marker. This way crosses were generated in which all chromosomes were replaced with WT chromosomes, except the one carrying the mutation and the respective balancer. Flies from this cross were then crossed with WT, where offspring without the balancer chromosome was used for the hetrozygot mutant experiment.
Drosophila melanogaster SRX10238594 SRP309293 7227 Testicle\_part\_1 tissue: Testicle_part_1 NEB NA breeding_method: Flies were maintained on standard-diet at 25C. 0-4 days old flies were manually sorted to 15 males and 15 females per vial (or 45+45 in bottles) and allowed to lay eggs for 4 days. Flies were crossed on Thursday, flipped on Monday and virgins collected the following Monday. On Thursday flies were crossed again establishing a 2-week generation cycle. Genetic background was equalized between mutant and WT strains by crossing the mutant lines over double balancer lines where chromosomes were followed with a visible marker. This way crosses were generated in which all chromosomes were replaced with WT chromosomes, except the one carrying the mutation and the respective balancer. Flies from this cross were then crossed with WT, where offspring without the balancer chromosome was used for the hetrozygot mutant experiment.
Homo sapiens SRX23679500 SRP490696 9606 Whole Blood phenotype: Severe symptoms progressed after 14 days of follow-up Illumina NA NA
Homo sapiens SRX23679503 SRP490696 9606 Whole Blood phenotype: At least one warning signs upon clinical evaluation without progression Illumina NA NA
Homo sapiens SRX23679504 SRP490696 9606 Whole Blood phenotype: Severe symptoms progressed after 14 days of follow-up Illumina NA NA
Homo sapiens SRX23679501 SRP490696 9606 Whole Blood phenotype: At least one warning signs upon clinical evaluation without progression Illumina NA NA
Brassica napus SRX3755441 SRP133792 3708 bud cultivar: CN12AB NEB NA NA
Zea mays subsp. mays SRX826359 SRP051654 381124 Leaf cultivar: VQL-2 Illumina NA NA
Homo sapiens SRX23679502 SRP490696 9606 Whole Blood phenotype: Severe symptoms progressed after 14 days of follow-up Illumina NA NA
Brassica napus SRX3755442 SRP133792 3708 bud cultivar: CN12AB NEB NA NA
Homo sapiens SRX23679508 SRP490696 9606 Whole Blood phenotype: At least one warning signs upon clinical evaluation without progression Illumina NA NA
Brassica napus SRX3755440 SRP133792 3708 bud cultivar: CN12AB NEB NA NA
Homo sapiens SRX23679505 SRP490696 9606 Whole Blood phenotype: Severe symptoms progressed after 14 days of follow-up Illumina NA NA
Poncirus SRX8928572 SRP277135 37881 Juice Sac cultivar: Wangcang large-leaf zhi Illumina NA NA
Homo sapiens SRX23679506 SRP490696 9606 Whole Blood phenotype: Severe symptoms progressed after 14 days of follow-up Illumina NA NA
Poncirus SRX8928573 SRP277135 37881 Juice Sac cultivar: Wangcang large-leaf zhi Illumina NA NA
Poncirus SRX8928570 SRP277135 37881 Juice Sac cultivar: Wangcang large-leaf zhi Illumina NA NA
Poncirus SRX8928571 SRP277135 37881 Juice Sac cultivar: Wangcang large-leaf zhi Illumina NA NA
Eptesicus fuscus SRX478607 SRP023527 29078 Testes tissue: Testes NEB NA NA
Homo sapiens SRX2839072 SRP107326 9606 colon phenotype: adjacent normal adapter_trimmed colorectal cancer NA
Homo sapiens SRX2839073 SRP107326 9606 colon phenotype: neoplastic adapter_trimmed colorectal cancer NA
Homo sapiens SRX2839070 SRP107326 9606 colon phenotype: adjacent normal adapter_trimmed colorectal cancer NA
Homo sapiens SRX2839071 SRP107326 9606 colon phenotype: neoplastic adapter_trimmed colorectal cancer NA
Drosophila melanogaster SRX10238591 SRP309293 7227 sperm tissue: sperm NEB NA breeding_method: Flies were maintained on standard-diet at 25C. 0-4 days old flies were manually sorted to 15 males and 15 females per vial (or 45+45 in bottles) and allowed to lay eggs for 4 days. Flies were crossed on Thursday, flipped on Monday and virgins collected the following Monday. On Thursday flies were crossed again establishing a 2-week generation cycle. Genetic background was equalized between mutant and WT strains by crossing the mutant lines over double balancer lines where chromosomes were followed with a visible marker. This way crosses were generated in which all chromosomes were replaced with WT chromosomes, except the one carrying the mutation and the respective balancer. Flies from this cross were then crossed with WT, where offspring without the balancer chromosome was used for the hetrozygot mutant experiment.