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miSRA: search preprocessed public small-RNA data against your reference sequences (miRNA, tRNA, etc)
ugr
miSRAdb automatic annotations
Experiments, taxonID and sample tag are searchable fields
Name Exp Study TaxonID SampleTag SampleTag2 LibraryInf Disease Method
Homo sapiens SRX23679519 SRP490696 9606 Whole Blood phenotype: At least one warning signs upon clinical evaluation without progression Illumina NA NA
Homo sapiens SRX23679516 SRP490696 9606 Whole Blood phenotype: At least one warning signs upon clinical evaluation without progression Illumina NA NA
Homo sapiens SRX23679517 SRP490696 9606 Whole Blood phenotype: At least one warning signs upon clinical evaluation without progression Illumina NA NA
Homo sapiens SRX23679509 SRP490696 9606 Whole Blood phenotype: Severe symptoms progressed after 14 days of follow-up Illumina NA NA
Sternopygus macrurus SRX826362 SRP042260 77841 electric organ cell_line: not applicable Illumina not applicable breeding_method: not applicable
Sternopygus macrurus SRX826363 SRP042260 77841 muscle cell_line: not applicable Illumina not applicable breeding_method: not applicable
Homo sapiens SRX2839040 SRP107326 9606 rectum phenotype: adjacent normal adapter_trimmed colorectal cancer NA
Bos taurus SRX6610780 SRP216765 9913 udder cultivar: Ling Chen Illumina NA NA
Homo sapiens SRX2839043 SRP107326 9606 colon phenotype: adjacent normal adapter_trimmed colorectal cancer NA
Homo sapiens SRX2839044 SRP107326 9606 colon phenotype: neoplastic adapter_trimmed colorectal cancer NA
Homo sapiens SRX2839041 SRP107326 9606 rectum phenotype: adjacent normal adapter_trimmed colorectal cancer NA
Bos taurus SRX6610781 SRP216765 9913 udder cultivar: Ling Chen Illumina NA NA
Homo sapiens SRX2839042 SRP107326 9606 rectum phenotype: neoplastic adapter_trimmed colorectal cancer NA
Bos taurus SRX6610782 SRP216765 9913 udder cultivar: Ling Chen Illumina NA NA
Drosophila melanogaster SRX10238580 SRP309293 7227 sperm tissue: sperm NEB NA breeding_method: Flies were maintained on standard-diet at 25C. 0-4 days old flies were manually sorted to 15 males and 15 females per vial (or 45+45 in bottles) and allowed to lay eggs for 4 days. Flies were crossed on Thursday, flipped on Monday and virgins collected the following Monday. On Thursday flies were crossed again establishing a 2-week generation cycle. Genetic background was equalized between mutant and WT strains by crossing the mutant lines over double balancer lines where chromosomes were followed with a visible marker. This way crosses were generated in which all chromosomes were replaced with WT chromosomes, except the one carrying the mutation and the respective balancer. Flies from this cross were then crossed with WT, where offspring without the balancer chromosome was used for the hetrozygot mutant experiment.
Homo sapiens SRX2839047 SRP107326 9606 colon phenotype: adjacent normal adapter_trimmed colorectal cancer NA
Drosophila melanogaster SRX10238581 SRP309293 7227 sperm tissue: sperm NEB NA breeding_method: Flies were maintained on standard-diet at 25C. 0-4 days old flies were manually sorted to 15 males and 15 females per vial (or 45+45 in bottles) and allowed to lay eggs for 4 days. Flies were crossed on Thursday, flipped on Monday and virgins collected the following Monday. On Thursday flies were crossed again establishing a 2-week generation cycle. Genetic background was equalized between mutant and WT strains by crossing the mutant lines over double balancer lines where chromosomes were followed with a visible marker. This way crosses were generated in which all chromosomes were replaced with WT chromosomes, except the one carrying the mutation and the respective balancer. Flies from this cross were then crossed with WT, where offspring without the balancer chromosome was used for the hetrozygot mutant experiment.
Homo sapiens SRX2839048 SRP107326 9606 colon phenotype: neoplastic adapter_trimmed colorectal cancer NA
Homo sapiens SRX2839045 SRP107326 9606 colon phenotype: adjacent normal adapter_trimmed colorectal cancer NA
Homo sapiens SRX2839046 SRP107326 9606 colon phenotype: neoplastic adapter_trimmed colorectal cancer NA
Homo sapiens SRX23679521 SRP490696 9606 Whole Blood phenotype: At least one warning signs upon clinical evaluation without progression Illumina NA NA
Homo sapiens SRX23679522 SRP490696 9606 Whole Blood phenotype: At least one warning signs upon clinical evaluation without progression Illumina NA NA
Citrus SRX8928558 SRP277135 2706 Juice Sac cultivar: Hong Ju Illumina NA NA
Homo sapiens SRX23679520 SRP490696 9606 Whole Blood phenotype: At least one warning signs upon clinical evaluation without progression Illumina NA NA
Citrus SRX8928559 SRP277135 2706 Juice Sac cultivar: Hong Ju Illumina NA NA