alignment to pre-microRNA

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CGGGGCGGCCGCTCTCCCTGTCCTCCAGGAGCTCACGTGTGCCTGCCTGTGAGCGCCTCGACGACAGAGCCGGCGCCTGCCCCAGTGTCTGCGC  626(164.6/794.3) adj:622.8
.(((((((.((((..(.(((((.((.(((.(((((((.((....)).))))))).))).)).))))).)..)))).)))))))...........
TCCCTGTCCTCCAGGAGCTC 202(53.1/256.3) adj:202 + lv3p|lv3pT|lv3p#-3
TGAGCGCCTCGACGACAGAGC 93(24.5/118) adj:93 + lv3p|lv3pT|lv3p#-2
TGAGCGCCTCGACGACAGAGCC 76(20/96.4) adj:76 + lv3p|lv3pT|lv3p#-1
TGAGCGCCTCGACGACAGAGCT 72(18.9/91.4) adj:72 + nta#T|nta#T#1
TCCCTGTCCTCCAGGAGCTCACG 28(7.4/35.5) adj:28 + exact
TCCCTGTCCTCCAGGAGCT 27(7.1/34.3) adj:27 + lv3p|lv3pT|lv3p#-4
TGAGCGCCTCGACGACAGAG 19(5/24.1) adj:19 + lv3p|lv3pT|lv3p#-3
TGAGCGCCTCGACGACAGAGCCG 17(4.5/21.6) adj:17 + exact
TGAGCGCCTCGACGACAGA 14(3.7/17.8) adj:14 + lv3p|lv3pT|lv3p#-4
AGCGCCTCGACGACAGAGCC 12(3.2/15.2) adj:12 + mv
TCCCTGTCCTCCAGGAGCTCA 9(2.4/11.4) adj:9 + lv3p|lv3pT|lv3p#-2
TCCCTGTCCTCCAGGAGC 7(1.8/8.9) adj:7 + lv3p|lv3pT|lv3p#-5
TGAGCGCCTCGACGACAGAGCCT 7(1.8/8.9) adj:7 + nta#T|nta#T#1
TGAGCGCCTCGACGACAGAGA 7(1.8/8.9) adj:7 + nta#A|nta#A#1
TCCCTGTCCTCCAGGAGCTCAC 6(1.6/7.6) adj:6 + lv3p|lv3pT|lv3p#-1
TGAGCGCCTCGACGACAGAGCCGT 6(1.6/7.6) adj:6 + nta#T|nta#T#1
CGTGTGCCTGCCTGTG 4(1.1/5.1) adj:0.8 + .
TCCCTGTCCTCCAGGAGCTCACGA 3(0.8/3.8) adj:3 + nta#A|nta#A#1
AGCGCCTCGACGACAGAGCCG 3(0.8/3.8) adj:3 + lv5p|lv5pT|lv5p#-2
TCCCTGTCCTCCAGGAGCTCACGT 2(0.5/2.5) adj:2 + lv3p|lv3pE|lv3p#1
TCCCTGTCCTCCAGGAGCTCAA 2(0.5/2.5) adj:2 + nta#A|nta#A#1
TCCCTGTCCTCCAGGAGCTCT 2(0.5/2.5) adj:2 + nta#T|nta#T#1
TGAGCGCCTCGACGACAGAGCCGTT 2(0.5/2.5) adj:2 + nta#T|nta#T#2
TGAGCGCCTCGACGACAGAGT 2(0.5/2.5) adj:2 + nta#T|nta#T#1
GAGCGCCTCGACGACAGAGCC 2(0.5/2.5) adj:2 + mv
AGCGCCTCGACGACAGAGC 2(0.5/2.5) adj:2 + mv