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miSRA: search preprocessed public small-RNA data against your reference sequences (miRNA, tRNA, etc)
ugr
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Name Exp Study TaxonID SampleTag SampleTag2 LibraryInf Disease Method
Heligmosomoides polygyrus bakeri SRX4394664 SRP153922 375939 Input pellet treatment protocol: Nematodes were disrupted in 700 µl of Qiazol (Qiagen) using mechanical disruption with 5 mm stainless steel beads (Qiagen) on a Tissue Lyser II (30hz for 2 min twice; Qiagen) Illumina NA treatment protocol: Nematodes were disrupted in 700 µl of Qiazol (Qiagen) using mechanical disruption with 5 mm stainless steel beads (Qiagen) on a Tissue Lyser II (30hz for 2 min twice; Qiagen)
Arabidopsis thaliana SRX5213669 SRP176450 3702 inflorescence genotype: DMS3-ZF_in_fwa Illumina NA NA
Heligmosomoides polygyrus bakeri SRX4394663 SRP153922 375939 Extracellular vesicles treatment protocol: Nematodes were disrupted in 700 µl of Qiazol (Qiagen) using mechanical disruption with 5 mm stainless steel beads (Qiagen) on a Tissue Lyser II (30hz for 2 min twice; Qiagen) Illumina NA treatment protocol: Nematodes were disrupted in 700 µl of Qiazol (Qiagen) using mechanical disruption with 5 mm stainless steel beads (Qiagen) on a Tissue Lyser II (30hz for 2 min twice; Qiagen)
Arabidopsis thaliana SRX5213668 SRP176450 3702 inflorescence genotype: DMS3-ZF_in_fwa Illumina NA NA
Heligmosomoides polygyrus bakeri SRX4394666 SRP153922 375939 Input supernatant treatment protocol: Nematodes were disrupted in 700 µl of Qiazol (Qiagen) using mechanical disruption with 5 mm stainless steel beads (Qiagen) on a Tissue Lyser II (30hz for 2 min twice; Qiagen) Illumina NA treatment protocol: Nematodes were disrupted in 700 µl of Qiazol (Qiagen) using mechanical disruption with 5 mm stainless steel beads (Qiagen) on a Tissue Lyser II (30hz for 2 min twice; Qiagen)
Heligmosomoides polygyrus bakeri SRX4394665 SRP153922 375939 Input pellet treatment protocol: Nematodes were disrupted in 700 µl of Qiazol (Qiagen) using mechanical disruption with 5 mm stainless steel beads (Qiagen) on a Tissue Lyser II (30hz for 2 min twice; Qiagen) Illumina NA treatment protocol: Nematodes were disrupted in 700 µl of Qiazol (Qiagen) using mechanical disruption with 5 mm stainless steel beads (Qiagen) on a Tissue Lyser II (30hz for 2 min twice; Qiagen)
Caenorhabditis elegans SRX4394668 SRP153922 6239 Adult worms treatment protocol: Nematodes were harvested from the plates and flash frozen. Illumina NA treatment protocol: Nematodes were harvested from the plates and flash frozen.
Heligmosomoides polygyrus bakeri SRX4394667 SRP153922 375939 Input supernatant treatment protocol: Nematodes were disrupted in 700 µl of Qiazol (Qiagen) using mechanical disruption with 5 mm stainless steel beads (Qiagen) on a Tissue Lyser II (30hz for 2 min twice; Qiagen) Illumina NA treatment protocol: Nematodes were disrupted in 700 µl of Qiazol (Qiagen) using mechanical disruption with 5 mm stainless steel beads (Qiagen) on a Tissue Lyser II (30hz for 2 min twice; Qiagen)
Caenorhabditis elegans SRX4394669 SRP153922 6239 Adult worms treatment protocol: Nematodes were harvested from the plates and flash frozen. Illumina NA treatment protocol: Nematodes were harvested from the plates and flash frozen.
Oncorhynchus mykiss SRX3898659 SRP137827 8022 Liver genotype: wild type Illumina NA NA
Arabidopsis thaliana SRX5213672 SRP176450 3702 inflorescence genotype: DMS3-ZF_in_Col-0 Illumina NA NA
Oncorhynchus mykiss SRX3898658 SRP137827 8022 Liver genotype: wild type Illumina NA NA
Arabidopsis thaliana SRX5213671 SRP176450 3702 inflorescence genotype: DMS3-ZF_in_fwa_x_nrpd1 Illumina NA NA
Arabidopsis thaliana SRX5213674 SRP176450 3702 inflorescence genotype: DMS3-ZF_in_Col-0 Illumina NA NA
Arabidopsis thaliana SRX5213673 SRP176450 3702 inflorescence genotype: DMS3-ZF_in_Col-0 Illumina NA NA