miSRA: search preprocessed public small-RNA data against your reference sequences (miRNA, tRNA, etc)
ugr
miSRAdb automatic annotations
Experiments, taxonID and sample tag are searchable fields
Name Exp Study TaxonID SampleTag SampleTag2 LibraryInf Disease Method
Medicago truncatula SRX4109289 SRP148608 3880 mature leaves ecotype: HM109 Illumina NA NA
Danio rerio SRX4870978 SRP165278 7955 spleen treatment: control Bioo NA NA
Homo sapiens SRX20532554 SRP439980 9606 plasma tissue: plasma adapter_trimmed NA NA
Homo sapiens SRX20532553 SRP439980 9606 plasma tissue: plasma adapter_trimmed NA NA
Homo sapiens SRX20532552 SRP439980 9606 plasma tissue: plasma adapter_trimmed NA NA
Homo sapiens SRX20532551 SRP439980 9606 plasma tissue: plasma adapter_trimmed NA NA
Homo sapiens SRX14336739 SRP362145 9606 glandular epithelial cell cell type: glandular epithelial cell adapter_trimmed NA NA
Homo sapiens SRX20532550 SRP439980 9606 plasma tissue: plasma adapter_trimmed NA NA
Homo sapiens SRX14336738 SRP362145 9606 glandular epithelial cell cell type: glandular epithelial cell adapter_trimmed NA NA
Mus musculus SRX20639719 SRP441822 10090 MH-S cells cell line: MH-S cells Illumina NA NA
Beta vulgaris SRX3110286 SRP115884 161934 leaf tissue: leaf adapter_trimmed NA NA
Homo sapiens SRX14336737 SRP362145 9606 glandular epithelial cell cell type: glandular epithelial cell adapter_trimmed NA NA
Mus musculus SRX20639718 SRP441822 10090 MH-S cells cell line: MH-S cells Illumina NA NA
Homo sapiens SRX14336736 SRP362145 9606 glandular epithelial cell cell type: glandular epithelial cell adapter_trimmed NA NA
Mus musculus SRX20639717 SRP441822 10090 MH-S cells cell line: MH-S cells Illumina NA NA
Drosophila melanogaster SRX8777982 SRP272674 7227 testis data type: small RNA NEB NA NA
Mus musculus SRX18196951 SRP406682 10090 Limb\_Muscle cell compartment: Whole cell other NA NA
Homo sapiens SRX19555968 SRP425465 9606 H1299-shAGO2+AGO2-WT cell line: H1299-shAGO2+AGO2-WT NEB NA NA
Mus musculus SRX18196950 SRP406682 10090 Kidney cell compartment: Whole cell other NA NA
Mus musculus SRX18196955 SRP406682 10090 Lung cell compartment: Whole cell other NA NA
Mus musculus SRX18196954 SRP406682 10090 Skin cell compartment: Whole cell other NA NA
Mus musculus SRX18196953 SRP406682 10090 Pancreas cell compartment: Whole cell other NA NA
Mus musculus SRX18196952 SRP406682 10090 BAT cell compartment: Whole cell other NA NA
Homo sapiens SRX19555969 SRP425465 9606 H1299-shAGO2+AGO2-S417A cell line: H1299-shAGO2+AGO2-S417A NEB NA NA
Mus musculus SRX18196959 SRP406682 10090 MAT cell compartment: Whole cell other NA NA