miSRA: search preprocessed public small-RNA data against your reference sequences (miRNA, tRNA, etc)
ugr
miSRAdb automatic annotations
Experiments, taxonID and sample tag are searchable fields
Name Exp Study TaxonID SampleTag SampleTag2 LibraryInf Disease Method
Cucumis sativus SRX1567760 SRP069805 3659 Root cultivar: Chinese long NEB NA NA
Caenorhabditis elegans SRX7294431 SRP235384 6239 Cloning N2 small RNA treatment: PIR-1 NEB NA NA
NA SRX1014915 SRP057853 5911 Conjugating cells at 10.5 hpm genotype/variation: EZL1 MAC-KO NEB NA NA
Caenorhabditis elegans SRX7294430 SRP235384 6239 Cloning N2 small RNA treatment: PIR-1 NEB NA NA
NA SRX1014913 SRP057853 5911 Conjugating cells at 10.5 hpm genotype/variation: TWI1 MAC-KO NEB NA NA
Medicago truncatula SRX4109291 SRP148608 3880 mature leaves ecotype: HM112 Illumina NA NA
Medicago truncatula SRX4109290 SRP148608 3880 mature leaves ecotype: HM111 Illumina NA NA
Cucumis sativus SRX1567766 SRP069805 3659 Shoot apex cultivar: Chinese long NEB NA NA
Caenorhabditis elegans SRX7294437 SRP235384 6239 Cloning tbc-11(ok2567) small RNA treatment: PIR-1 NEB NA NA
Cucumis sativus SRX1567765 SRP069805 3659 Shoot apex cultivar: Chinese long other NA NA
Caenorhabditis elegans SRX7294436 SRP235384 6239 Cloning tbc-11(ok2567) small RNA treatment: PIR-1 NEB NA NA
Homo sapiens SRX9162297 SRP280103 9606 Calu-3 cell line: Calu-3 Illumina NA NA
Homo sapiens SRX9162296 SRP280103 9606 Calu-3 cell line: Calu-3 Illumina NA NA
Homo sapiens SRX20532549 SRP439980 9606 plasma tissue: plasma adapter_trimmed NA NA
Homo sapiens SRX9162295 SRP280103 9606 Calu-3 cell line: Calu-3 Illumina NA NA
Mus musculus SRX11657267 SRP331238 10090 NIH 3T3 cells cell type: NIH 3T3 cells Qiagen_UMI NA NA
Homo sapiens SRX20532548 SRP439980 9606 plasma tissue: plasma adapter_trimmed NA NA
Homo sapiens SRX9162294 SRP280103 9606 Calu-3 cell line: Calu-3 Illumina NA NA
Mus musculus SRX11657266 SRP331238 10090 Mesenchymal stem cells cell type: Mesenchymal stem cells Qiagen_UMI NA NA
Homo sapiens SRX9162299 SRP280103 9606 Calu-3 cell line: Calu-3 Illumina NA NA
Homo sapiens SRX9162298 SRP280103 9606 Calu-3 cell line: Calu-3 Illumina NA NA
Triticum aestivum SRX6785417 SRP219973 4565 seed cell_line: not collected Illumina not collected growth_protocol: not collected
Triticum aestivum SRX6785416 SRP219973 4565 seed cell_line: not collected Illumina not collected growth_protocol: not collected
Triticum aestivum SRX6785415 SRP219973 4565 seed cell_line: not collected Illumina not collected growth_protocol: not collected
Triticum aestivum SRX6785414 SRP219973 4565 seed cell_line: not collected Illumina not collected growth_protocol: not collected