miSRA: search preprocessed public small-RNA data against your reference sequences (miRNA, tRNA, etc)
miSRAdb automatic annotations
Experiments, taxonID and sample tag are searchable fields
| Name | Exp | Study | TaxonID | SampleTag | SampleTag2 | LibraryInf | Disease | Method |
|---|---|---|---|---|---|---|---|---|
| Homo sapiens | SRX12416166 | SRP339504 | 9606 | CD44+\_colon\_cells | NA | Bioo | NA | NA |
| Homo sapiens | SRX13273027 | SRP348989 | 9606 | Plasma | tissue: Plasma | Qiagen_UMI | NHV | protocol: Qiaseq |
| Mus musculus | SRX3110389 | SRP115890 | 10090 | Mouse embryonic fibroblast | molecule subtype: small RNA | NEB | NA | NA |
| Triticum turgidum | SRX512894 | SRP041022 | 4571 | seedling | NA | Illumina_2 | NA | NA |
| Homo sapiens | SRX12416165 | SRP339504 | 9606 | CD66a+\_colon\_cells | NA | Bioo | NA | NA |
| Homo sapiens | SRX13273026 | SRP348989 | 9606 | Plasma | tissue: Plasma | Qiagen_UMI | NHV | protocol: Qiaseq |
| Caenorhabditis nigoni | SRX1469239 | SRP067043 | 1611254 | 200 individual males | NA | Illumina | NA | NA |
| Mus musculus | SRX3110388 | SRP115890 | 10090 | Mouse embryonic fibroblast | molecule subtype: small RNA | NEB | NA | NA |
| Homo sapiens | SRX12416164 | SRP339504 | 9606 | CD44+\_colon\_cells | NA | Bioo | NA | NA |
| Homo sapiens | SRX13273025 | SRP348989 | 9606 | Plasma | tissue: Plasma | Qiagen_UMI | NHV | protocol: Qiaseq |
| Caenorhabditis nigoni | SRX1469238 | SRP067043 | 1611254 | 200 individual males | NA | Illumina | NA | NA |
| Homo sapiens | SRX12416169 | SRP339504 | 9606 | CD66a+\_colon\_cells | surgical treatment: No | Bioo | NA | NA |
| Homo sapiens | SRX12416168 | SRP339504 | 9606 | CD44+\_colon\_cells | surgical treatment: No | Bioo | NA | NA |
| Homo sapiens | SRX13273029 | SRP348989 | 9606 | Plasma | tissue: Plasma | Qiagen_UMI | NHV | protocol: Qiaseq |
| Homo sapiens | SRX13273042 | SRP348989 | 9606 | Plasma | tissue: Plasma | Illumina | NHV | protocol: NEXTFLEX |
| Homo sapiens | SRX13273041 | SRP348989 | 9606 | Plasma | tissue: Plasma | Illumina | NHV | protocol: CleanTag |
| Rattus norvegicus | SRX2160899 | SRP089748 | 10116 | cartilage | cultivar: missing | Illumina | NA | NA |
| Homo sapiens | SRX13273040 | SRP348989 | 9606 | Plasma | tissue: Plasma | Illumina | NHV | protocol: CleanTag |
| Rattus norvegicus | SRX2160898 | SRP089748 | 10116 | cartilage | cultivar: missing | Illumina | NA | NA |
| Rattus norvegicus | SRX2160897 | SRP089748 | 10116 | cartilage | cultivar: missing | Illumina | NA | NA |
| Homo sapiens | SRX13273046 | SRP348989 | 9606 | Plasma | tissue: Plasma | Illumina | NHV | protocol: RealSeq |
| Rattus norvegicus | SRX2160896 | SRP089748 | 10116 | cartilage | cultivar: missing | Illumina | NA | NA |
| Homo sapiens | SRX13273045 | SRP348989 | 9606 | Plasma | tissue: Plasma | Illumina | NHV | protocol: RealSeq |
| Homo sapiens | SRX13273044 | SRP348989 | 9606 | Plasma | tissue: Plasma | Illumina | NHV | protocol: NEXTFLEX |
| Homo sapiens | SRX13273043 | SRP348989 | 9606 | Plasma | tissue: Plasma | Illumina_2 | NHV | protocol: NEXTFLEX |