miSRA: search preprocessed public small-RNA data against your reference sequences (miRNA, tRNA, etc)
ugr
miSRAdb automatic annotations
Experiments, taxonID and sample tag are searchable fields
Name Exp Study TaxonID SampleTag SampleTag2 LibraryInf Disease Method
Pogostemon cablin SRX11144766 SRP324047 28511 Root cultivar: Pogostemon cablin cv. Nanxiang adapter_trimmed NA NA
Pogostemon cablin SRX11144765 SRP324047 28511 Root cultivar: Pogostemon cablin cv. Nanxiang adapter_trimmed NA NA
Pogostemon cablin SRX11144764 SRP324047 28511 Root cultivar: Pogostemon cablin cv. Nanxiang adapter_trimmed NA NA
NA SRX2727845 SRP103635 4792 NA sample_type: Mycelium small RNA replicate 1 Illumina NA NA
NA SRX2727844 SRP103635 4792 NA sample_type: Mycelium small RNA replicate 2 Illumina NA NA
NA SRX2727843 SRP103635 4792 NA sample_type: Mycelium small RNA replicate 3 Illumina NA NA
Mus musculus SRX10378829 SRP311265 10090 cell line cell type: cell line NEB NA NA
NA SRX2727842 SRP103635 4792 NA sample_type: Arabidopsis thaliana roots infected by P. parasitica Pp016 3hpi small RNA Illumina NA NA
Mus musculus SRX10378828 SRP311265 10090 cell line cell type: cell line NEB NA NA
NA SRX2727841 SRP103635 4792 NA sample_type: Arabidopsis thaliana roots infected by P. parasitica Pp016 6hpi small RNA Illumina NA NA
NA SRX2727840 SRP103635 4792 NA sample_type: Arabidopsis thaliana roots infected by P. parasitica Pp016 12hpi small RNA Illumina NA NA
Mus musculus SRX18197486 SRP406682 10090 GAT cell compartment: Whole cell other NA NA
Homo sapiens SRX22829258 SRP476635 9606 embryo tissue: embryo Bioo NA NA
Mus musculus SRX18197485 SRP406682 10090 BAT cell compartment: Whole cell other NA NA
Homo sapiens SRX22829257 SRP476635 9606 embryo tissue: embryo Bioo NA NA
Mus musculus SRX2326019 SRP092566 10090 sensorimotor cortex tissue: sensorimotor cortex Bioo NA NA
Mus musculus SRX18197484 SRP406682 10090 Bone cell compartment: Whole cell other NA NA
Homo sapiens SRX22829256 SRP476635 9606 embryo tissue: embryo Bioo NA NA
Mus musculus SRX2326018 SRP092566 10090 sensorimotor cortex tissue: sensorimotor cortex Bioo NA NA
Mus musculus SRX18197483 SRP406682 10090 SCAT cell compartment: Whole cell other NA NA
Homo sapiens SRX22829255 SRP476635 9606 embryo tissue: embryo Illumina_2 NA NA
Mus musculus SRX2326017 SRP092566 10090 sensorimotor cortex tissue: sensorimotor cortex Bioo NA NA
Homo sapiens SRX1357349 SRP065035 9606 plasma tissue: plasma adapter_trimmed NA NA
Homo sapiens SRX22829254 SRP476635 9606 embryo tissue: embryo Bioo NA NA
Homo sapiens SRX1357348 SRP065035 9606 plasma tissue: plasma adapter_trimmed NA NA