Menu
miSRA: search preprocessed public small-RNA data against your reference sequences (miRNA, tRNA, etc)
ugr
miSRAdb automatic annotations
Experiments, taxonID and sample tag are searchable fields
Name Exp Study TaxonID SampleTag SampleTag2 LibraryInf Disease Method
Homo sapiens SRX21864690 SRP462775 9606 peripheral blood genotype: wild type sequence of FXN gene NEB Healthy individual (control) NA
Mus musculus SRX8876099 SRP275697 10090 Uterus genotype: Pgr +/+ Illumina NA NA
Homo sapiens SRX19476638 SRP423989 9606 peripheral blood cells tissue: peripheral blood cells Qiagen_UMI NA NA
Homo sapiens SRX19476637 SRP423989 9606 peripheral blood cells tissue: peripheral blood cells Qiagen_UMI NA NA
Homo sapiens SRX19476632 SRP423989 9606 peripheral blood cells tissue: peripheral blood cells Qiagen_UMI NA NA
Homo sapiens SRX19476631 SRP423989 9606 peripheral blood cells tissue: peripheral blood cells Qiagen_UMI NA NA
Homo sapiens SRX19476630 SRP423989 9606 peripheral blood cells tissue: peripheral blood cells Qiagen_UMI NA NA
Homo sapiens SRX19476636 SRP423989 9606 peripheral blood cells tissue: peripheral blood cells Qiagen_UMI NA NA
Homo sapiens SRX19476635 SRP423989 9606 peripheral blood cells tissue: peripheral blood cells Qiagen_UMI NA NA
Homo sapiens SRX19476634 SRP423989 9606 peripheral blood cells tissue: peripheral blood cells Qiagen_UMI NA NA
Homo sapiens SRX19476633 SRP423989 9606 peripheral blood cells tissue: peripheral blood cells Qiagen_UMI NA NA
Homo sapiens SRX19476629 SRP423989 9606 peripheral blood cells tissue: peripheral blood cells Qiagen_UMI NA NA
Homo sapiens SRX19476628 SRP423989 9606 peripheral blood cells tissue: peripheral blood cells Qiagen_UMI NA NA
Rattus norvegicus SRX5178709 SRP174408 10116 Hippocampal tissue tissue: Hippocampal tissue Illumina NA NA
Homo sapiens SRX19476627 SRP423989 9606 peripheral blood cells tissue: peripheral blood cells Qiagen_UMI NA NA
Rattus norvegicus SRX5178708 SRP174408 10116 Hippocampal tissue tissue: Hippocampal tissue Illumina NA NA
Homo sapiens SRX19476626 SRP423989 9606 peripheral blood cells tissue: peripheral blood cells Qiagen_UMI NA NA
Rattus norvegicus SRX5178707 SRP174408 10116 Hippocampal tissue tissue: Hippocampal tissue Illumina NA NA
Medicago truncatula SRX3703201 SRP131849 3880 NA Genotype: Jemalong A17 adapter_trimmed NA Extract_protocol: Plant roots and nodules were harvested and crushed with liquid nitrogen. small RNA were isolated from 100 mg of powder with the mirVana miRNA isolation kit (Ambion) according to the manufacturer s instructions. For the other libraries, total RNAs were extracted using 1 mL of Trizol per 50-100 mg of powder. Phenol-Chloroform separation, isopropanol precipitation, ethanol wash and RNA solubilization were performed according to the TRI REAGENT manufacturer s instructions. RNA integrity and quality have been checked thanks to the Agilent Bioanalyzer 2100
Homo sapiens SRX21864679 SRP462775 9606 peripheral blood genotype: homozygous expansion of GAA repeat sequence in FXN gene NEB Friedreich Ataxia patients sample NA
Medicago truncatula SRX3703200 SRP131849 3880 NA Genotype: Jemalong A17 adapter_trimmed NA Extract_protocol: Plant roots and nodules were harvested and crushed with liquid nitrogen. small RNA were isolated from 100 mg of powder with the mirVana miRNA isolation kit (Ambion) according to the manufacturer s instructions. For the other libraries, total RNAs were extracted using 1 mL of Trizol per 50-100 mg of powder. Phenol-Chloroform separation, isopropanol precipitation, ethanol wash and RNA solubilization were performed according to the TRI REAGENT manufacturer s instructions. RNA integrity and quality have been checked thanks to the Agilent Bioanalyzer 2100
Homo sapiens SRX21864678 SRP462775 9606 peripheral blood genotype: homozygous expansion of GAA repeat sequence in FXN gene NEB Friedreich Ataxia patients sample NA
Homo sapiens SRX19476621 SRP423989 9606 peripheral blood cells tissue: peripheral blood cells Qiagen_UMI NA NA
Rattus norvegicus SRX5178702 SRP174408 10116 Hippocampal tissue tissue: Hippocampal tissue Illumina NA NA
Homo sapiens SRX19476620 SRP423989 9606 peripheral blood cells tissue: peripheral blood cells Qiagen_UMI NA NA