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If you use the sRNAtoolbox webserver, please cite our latest publication:

sRNAbench and sRNAtoolbox 2019: intuitive fast small RNA profiling and differential expression. E. Aparicio-Puerta, R. Lebrón, A. Rueda, C. Gómez-Martín, S. Giannoukakos, D. Jaspez, J.M. Medina, A. Zubkovic, I. Jurak, B. Fromm, J.A. Marchal, J.L. Oliver, M. Hackenberg Nucleic Acids Res. 2019 Jul 2;47(W1):W530-W535. doi: 10.1093/nar/gkz415.

Please also consider citing:

• sRNAtoolbox: an integrated collection of small RNA research tools. A. Rueda, G. Barturen, R. Lebrón, C. Gómez-Martín, A. Alganza, J.L. Oliver, M. Hackenberg. Nucleic Acids Research, Volume 43, Issue W1, 1 July 2015, Pages W467-W473, https://doi.org/10.1093/nar/gkv555

• sRNAbench: profiling of small RNAs and its sequence variants in single or multi-species high-throughput experiments. G. Barturen, A. Rueda, M. Hamberg, A. Alganza, R. Lebron, M. Kotsyfakis, B. Shi, D. Koppers-Lalic, M. Hackenberg. Methods Next-Generation Seq. 2014; 1: 21–31 View article

• Ultrafast and memory-efficient alignment of short DNA sequences to the human genome. B. Langmead, C. Trapnell, M. Pop, S.L. Salzberg . Genome Biol 10, R25 (2009). doi.org/10.1186/gb-2009-10-3-r25

• miRBase: integrating microRNA annotation and deep-sequencing data. A. Kozomara, S. Griffiths-Jones . Nucleic Acids Research, Volume 39, Issue suppl_1, 1 January 2011, Pages D152–D157, doi.org/10.1093/nar/gkq1027

sRNAtoolbox was developed by the Computational Epigenomics Group at University of Granada