miSRA: search preprocessed public small-RNA data against your reference sequences (miRNA, tRNA, etc)
Filter the database to select the samples
| Name | Exp | Study | TaxonID | SampleTag | SampleTag2 | LibraryInf | Disease | Method |
|---|---|---|---|---|---|---|---|---|
| Homo sapiens | SRX23957672 | SRP495402 | 9606 | blood serum | tissue: blood serum | Qiagen_UMI | NA | sequencing batch: 1 |
| Homo sapiens | SRX23957679 | SRP495402 | 9606 | blood serum | tissue: blood serum | Qiagen_UMI | NA | sequencing batch: 2 |
| Arabidopsis thaliana | SRX7050411 | SRP226805 | 3702 | whole seedling | cell_line: not applicable | adapter_trimmed | not applicable | growth_protocol: Sterilized seeds were suspended in 0.1% agarose and plated on MS medium. Plates were grown at a tissue culture room for 10 days under a 16-h-light/8-h-dark photoperiod. |
| Homo sapiens | SRX23957678 | SRP495402 | 9606 | blood serum | tissue: blood serum | Qiagen_UMI | NA | sequencing batch: 2 |
| Homo sapiens | SRX23957677 | SRP495402 | 9606 | blood serum | tissue: blood serum | Qiagen_UMI | NA | sequencing batch: 1 |
| Homo sapiens | SRX23957676 | SRP495402 | 9606 | blood serum | tissue: blood serum | Qiagen_UMI | NA | sequencing batch: 3 |
| Homo sapiens | DRX037302 | DRP001151 | 9606 | breast | tissue_type: breast | Illumina | NA | library_protocol: OP-SOLEXA-shortRNA-TruSeq-v2.0 |
| Homo sapiens | DRX037301 | DRP001151 | 9606 | breast | tissue_type: breast | Illumina | NA | library_protocol: OP-SOLEXA-shortRNA-TruSeq-v2.0 |
| Arabidopsis thaliana | SRX7050414 | SRP226805 | 3702 | whole seedling | cell_line: not applicable | adapter_trimmed | not applicable | growth_protocol: Sterilized seeds were suspended in 0.1% agarose and plated on MS medium in which the sulfate-containing salts were replaced with equivalent amounts of chloride salts. Plates were grown at a tissue culture room for 10 days under a 16-h-light/8-h-dark photoperiod. |
| Homo sapiens | DRX037300 | DRP001151 | 9606 | breast | tissue_type: breast | Illumina | NA | library_protocol: OP-SOLEXA-shortRNA-TruSeq-v2.0 |
| Arabidopsis thaliana | SRX7050413 | SRP226805 | 3702 | whole seedling | cell_line: not applicable | adapter_trimmed | not applicable | growth_protocol: Sterilized seeds were suspended in 0.1% agarose and plated on MS medium in which ammonium nitrate was removed and potassium nitrate was replaced with equivalent amounts of potassium chloride. Plates were grown at a tissue culture room for 10 days under a 16-h-light/8-h-dark photoperiod. |
| Arabidopsis thaliana | SRX7050412 | SRP226805 | 3702 | whole seedling | cell_line: not applicable | adapter_trimmed | not applicable | growth_protocol: Sterilized seeds were suspended in 0.1% agarose and plated on MS medium without the addition of sucrose. Plates were grown at a tissue culture room for 10 days under a 16-h-light/8-h-dark photoperiod. |
| Homo sapiens | DRX037306 | DRP001151 | 9606 | breast | tissue_type: breast | Illumina | NA | NA |
| Homo sapiens | DRX037305 | DRP001151 | 9606 | breast | tissue_type: breast | Illumina | NA | library_protocol: OP-SOLEXA-shortRNA-TruSeq-v2.0 |
| Homo sapiens | DRX037304 | DRP001151 | 9606 | breast | tissue_type: breast | Illumina | NA | library_protocol: OP-SOLEXA-shortRNA-TruSeq-v2.0 |