miSRA: search preprocessed public small-RNA data against your reference sequences (miRNA, tRNA, etc)
Filter the database to select the samples
| Name | Exp | Study | TaxonID | SampleTag | SampleTag2 | LibraryInf | Disease | Method |
|---|---|---|---|---|---|---|---|---|
| Medicago truncatula | SRX3703200 | SRP131849 | 3880 | NA | Genotype: Jemalong A17 | adapter_trimmed | NA | Extract_protocol: Plant roots and nodules were harvested and crushed with liquid nitrogen. small RNA were isolated from 100 mg of powder with the mirVana miRNA isolation kit (Ambion) according to the manufacturer s instructions. For the other libraries, total RNAs were extracted using 1 mL of Trizol per 50-100 mg of powder. Phenol-Chloroform separation, isopropanol precipitation, ethanol wash and RNA solubilization were performed according to the TRI REAGENT manufacturer s instructions. RNA integrity and quality have been checked thanks to the Agilent Bioanalyzer 2100 |
| Homo sapiens | SRX21864678 | SRP462775 | 9606 | peripheral blood | genotype: homozygous expansion of GAA repeat sequence in FXN gene | NEB | Friedreich Ataxia patients sample | NA |
| Homo sapiens | SRX19476621 | SRP423989 | 9606 | peripheral blood cells | tissue: peripheral blood cells | Qiagen_UMI | NA | NA |
| Rattus norvegicus | SRX5178702 | SRP174408 | 10116 | Hippocampal tissue | tissue: Hippocampal tissue | Illumina | NA | NA |
| Homo sapiens | SRX19476620 | SRP423989 | 9606 | peripheral blood cells | tissue: peripheral blood cells | Qiagen_UMI | NA | NA |
| Rattus norvegicus | SRX5178701 | SRP174408 | 10116 | Hippocampal tissue | tissue: Hippocampal tissue | Illumina | NA | NA |
| Rattus norvegicus | SRX5178700 | SRP174408 | 10116 | Hippocampal tissue | tissue: Hippocampal tissue | Illumina | NA | NA |
| Homo sapiens | SRX19476625 | SRP423989 | 9606 | peripheral blood cells | tissue: peripheral blood cells | Qiagen_UMI | NA | NA |
| Rattus norvegicus | SRX5178706 | SRP174408 | 10116 | Hippocampal tissue | tissue: Hippocampal tissue | Illumina | NA | NA |
| Homo sapiens | SRX19476624 | SRP423989 | 9606 | peripheral blood cells | tissue: peripheral blood cells | Qiagen_UMI | NA | NA |
| Rattus norvegicus | SRX5178705 | SRP174408 | 10116 | Hippocampal tissue | tissue: Hippocampal tissue | Illumina | NA | NA |
| Homo sapiens | SRX19476623 | SRP423989 | 9606 | peripheral blood cells | tissue: peripheral blood cells | Qiagen_UMI | NA | NA |
| Rattus norvegicus | SRX5178704 | SRP174408 | 10116 | Hippocampal tissue | tissue: Hippocampal tissue | Illumina | NA | NA |
| Homo sapiens | SRX19476622 | SRP423989 | 9606 | peripheral blood cells | tissue: peripheral blood cells | Qiagen_UMI | NA | NA |
| Rattus norvegicus | SRX5178703 | SRP174408 | 10116 | Hippocampal tissue | tissue: Hippocampal tissue | Illumina | NA | NA |