miSRA: search preprocessed public small-RNA data against your reference sequences (miRNA, tRNA, etc)
ugr
Filter the database to select the samples
Name Exp Study TaxonID SampleTag SampleTag2 LibraryInf Disease Method
Mus musculus SRX2056710 SRP083078 10090 Heart tissue: Heart adapter_trimmed NA NA
Medicago truncatula SRX3703196 SRP131849 3880 NA Genotype: Jemalong A17 adapter_trimmed NA Extract_protocol: Plant roots and nodules were harvested and crushed with liquid nitrogen. small RNA were isolated from 100 mg of powder with the mirVana miRNA isolation kit (Ambion) according to the manufacturer s instructions. For the other libraries, total RNAs were extracted using 1 mL of Trizol per 50-100 mg of powder. Phenol-Chloroform separation, isopropanol precipitation, ethanol wash and RNA solubilization were performed according to the TRI REAGENT manufacturer s instructions. RNA integrity and quality have been checked thanks to the Agilent Bioanalyzer 2100
Medicago truncatula SRX3703195 SRP131849 3880 NA Genotype: Jemalong A17 adapter_trimmed NA Extract_protocol: Plant roots and nodules were harvested and crushed with liquid nitrogen. small RNA were isolated from 100 mg of powder with the mirVana miRNA isolation kit (Ambion) according to the manufacturer s instructions. For the other libraries, total RNAs were extracted using 1 mL of Trizol per 50-100 mg of powder. Phenol-Chloroform separation, isopropanol precipitation, ethanol wash and RNA solubilization were performed according to the TRI REAGENT manufacturer s instructions. RNA integrity and quality have been checked thanks to the Agilent Bioanalyzer 2100
Medicago truncatula SRX3703194 SRP131849 3880 NA Genotype: Jemalong A17 adapter_trimmed NA Extract_protocol: Plant roots and nodules were harvested and crushed with liquid nitrogen. small RNA were isolated from 100 mg of powder with the mirVana miRNA isolation kit (Ambion) according to the manufacturer s instructions. For the other libraries, total RNAs were extracted using 1 mL of Trizol per 50-100 mg of powder. Phenol-Chloroform separation, isopropanol precipitation, ethanol wash and RNA solubilization were performed according to the TRI REAGENT manufacturer s instructions. RNA integrity and quality have been checked thanks to the Agilent Bioanalyzer 2100
Medicago truncatula SRX3703193 SRP131849 3880 NA Genotype: Jemalong A17 adapter_trimmed NA Extract_protocol: Plant roots and nodules were harvested and crushed with liquid nitrogen. small RNA were isolated from 100 mg of powder with the mirVana miRNA isolation kit (Ambion) according to the manufacturer s instructions. For the other libraries, total RNAs were extracted using 1 mL of Trizol per 50-100 mg of powder. Phenol-Chloroform separation, isopropanol precipitation, ethanol wash and RNA solubilization were performed according to the TRI REAGENT manufacturer s instructions. RNA integrity and quality have been checked thanks to the Agilent Bioanalyzer 2100
Medicago truncatula SRX3703192 SRP131849 3880 NA Genotype: Jemalong A17 adapter_trimmed NA Extract_protocol: Plant roots and nodules were harvested and crushed with liquid nitrogen. small RNA were isolated from 100 mg of powder with the mirVana miRNA isolation kit (Ambion) according to the manufacturer s instructions. For the other libraries, total RNAs were extracted using 1 mL of Trizol per 50-100 mg of powder. Phenol-Chloroform separation, isopropanol precipitation, ethanol wash and RNA solubilization were performed according to the TRI REAGENT manufacturer s instructions. RNA integrity and quality have been checked thanks to the Agilent Bioanalyzer 2100
Medicago truncatula SRX3703191 SRP131849 3880 NA Genotype: Jemalong A17 adapter_trimmed NA Extract_protocol: Plant roots and nodules were harvested and crushed with liquid nitrogen. small RNA were isolated from 100 mg of powder with the mirVana miRNA isolation kit (Ambion) according to the manufacturer s instructions. For the other libraries, total RNAs were extracted using 1 mL of Trizol per 50-100 mg of powder. Phenol-Chloroform separation, isopropanol precipitation, ethanol wash and RNA solubilization were performed according to the TRI REAGENT manufacturer s instructions. RNA integrity and quality have been checked thanks to the Agilent Bioanalyzer 2100
Medicago truncatula SRX3703190 SRP131849 3880 NA Genotype: Jemalong A17 adapter_trimmed NA Extract_protocol: Plant roots and nodules were harvested and crushed with liquid nitrogen. small RNA were isolated from 100 mg of powder with the mirVana miRNA isolation kit (Ambion) according to the manufacturer s instructions. For the other libraries, total RNAs were extracted using 1 mL of Trizol per 50-100 mg of powder. Phenol-Chloroform separation, isopropanol precipitation, ethanol wash and RNA solubilization were performed according to the TRI REAGENT manufacturer s instructions. RNA integrity and quality have been checked thanks to the Agilent Bioanalyzer 2100
Homo sapiens SRX8949659 SRP277559 9606 Resting human CD4+ T cells treatment: antiCD3/antiCD28 NEB NA NA
Homo sapiens SRX8949658 SRP277559 9606 Resting human CD4+ T cells treatment: antiCD3/antiCD28 NEB NA NA
Homo sapiens SRX8949657 SRP277559 9606 Resting human CD4+ T cells treatment: IFN I NEB NA NA
Homo sapiens SRX8949656 SRP277559 9606 Resting human CD4+ T cells treatment: IFN I NEB NA NA
Mus musculus SRX4732959 SRP162454 10090 brain tissue: brain Illumina NA NA
Homo sapiens SRX15209829 SRP374307 9606 HCT116 cell line: HCT116 Bioo NA NA
Mus musculus SRX4732958 SRP162454 10090 brain tissue: brain Illumina NA NA