miSRA: search preprocessed public small-RNA data against your reference sequences (miRNA, tRNA, etc)
Filter the database to select the samples
| Name | Exp | Study | TaxonID | SampleTag | SampleTag2 | LibraryInf | Disease | Method |
|---|---|---|---|---|---|---|---|---|
| Homo sapiens | SRX3585154 | SRP131005 | 9606 | T-cell lymphoblastic lymphoma | cell type: T-cell lymphoblastic lymphoma | Illumina | NA | NA |
| Medicago truncatula | SRX3703198 | SRP131849 | 3880 | NA | Genotype: Jemalong A17 | adapter_trimmed | NA | Extract_protocol: Plant roots and nodules were harvested and crushed with liquid nitrogen. small RNA were isolated from 100 mg of powder with the mirVana miRNA isolation kit (Ambion) according to the manufacturer s instructions. For the other libraries, total RNAs were extracted using 1 mL of Trizol per 50-100 mg of powder. Phenol-Chloroform separation, isopropanol precipitation, ethanol wash and RNA solubilization were performed according to the TRI REAGENT manufacturer s instructions. RNA integrity and quality have been checked thanks to the Agilent Bioanalyzer 2100 |
| Mus musculus | SRX4732968 | SRP162454 | 10090 | brain | tissue: brain | Illumina | NA | NA |
| Homo sapiens | SRX3585153 | SRP131005 | 9606 | T-cell lymphoblastic lymphoma | cell type: T-cell lymphoblastic lymphoma | Illumina | NA | NA |
| Homo sapiens | SRX8949662 | SRP277559 | 9606 | Resting human CD4+ T cells | treatment: IFN I | NEB | NA | NA |
| Homo sapiens | SRX3585152 | SRP131005 | 9606 | control thymus | cell type: control thymus | Illumina | NA | NA |
| Homo sapiens | SRX8949661 | SRP277559 | 9606 | Resting human CD4+ T cells | treatment: None | NEB | NA | NA |
| Homo sapiens | SRX3585151 | SRP131005 | 9606 | control thymus | cell type: control thymus | Illumina | NA | NA |
| Homo sapiens | SRX8949660 | SRP277559 | 9606 | Resting human CD4+ T cells | treatment: antiCD3/antiCD28 | NEB | NA | NA |
| Homo sapiens | SRX3585150 | SRP131005 | 9606 | T-cell lymphoblastic lymphoma | cell type: T-cell lymphoblastic lymphoma | Illumina | NA | NA |
| Rattus norvegicus | SRX5178699 | SRP174408 | 10116 | Hippocampal tissue | tissue: Hippocampal tissue | Illumina | NA | NA |
| Homo sapiens | SRX10580763 | SRP314489 | 9606 | Stool | NA | NEB | NA | NA |
| Homo sapiens | SRX8949666 | SRP277559 | 9606 | Resting human CD4+ T cells | treatment: antiCD3/antiCD28 | NEB | NA | NA |
| Homo sapiens | SRX10580762 | SRP314489 | 9606 | Stool | NA | NEB | NA | NA |
| Homo sapiens | SRX8949665 | SRP277559 | 9606 | Resting human CD4+ T cells | treatment: antiCD3/antiCD28 | NEB | NA | NA |