miSRA: search preprocessed public small-RNA data against your reference sequences (miRNA, tRNA, etc)
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| Name | Exp | Study | TaxonID | SampleTag | SampleTag2 | LibraryInf | Disease | Method |
|---|---|---|---|---|---|---|---|---|
| Homo sapiens | SRX2839041 | SRP107326 | 9606 | rectum | phenotype: adjacent normal | adapter_trimmed | colorectal cancer | NA |
| Bos taurus | SRX6610781 | SRP216765 | 9913 | udder | cultivar: Ling Chen | Illumina | NA | NA |
| Homo sapiens | SRX2839042 | SRP107326 | 9606 | rectum | phenotype: neoplastic | adapter_trimmed | colorectal cancer | NA |
| Bos taurus | SRX6610782 | SRP216765 | 9913 | udder | cultivar: Ling Chen | Illumina | NA | NA |
| Drosophila melanogaster | SRX10238580 | SRP309293 | 7227 | sperm | tissue: sperm | NEB | NA | breeding_method: Flies were maintained on standard-diet at 25C. 0-4 days old flies were manually sorted to 15 males and 15 females per vial (or 45+45 in bottles) and allowed to lay eggs for 4 days. Flies were crossed on Thursday, flipped on Monday and virgins collected the following Monday. On Thursday flies were crossed again establishing a 2-week generation cycle. Genetic background was equalized between mutant and WT strains by crossing the mutant lines over double balancer lines where chromosomes were followed with a visible marker. This way crosses were generated in which all chromosomes were replaced with WT chromosomes, except the one carrying the mutation and the respective balancer. Flies from this cross were then crossed with WT, where offspring without the balancer chromosome was used for the hetrozygot mutant experiment. |
| Homo sapiens | SRX2839047 | SRP107326 | 9606 | colon | phenotype: adjacent normal | adapter_trimmed | colorectal cancer | NA |
| Drosophila melanogaster | SRX10238581 | SRP309293 | 7227 | sperm | tissue: sperm | NEB | NA | breeding_method: Flies were maintained on standard-diet at 25C. 0-4 days old flies were manually sorted to 15 males and 15 females per vial (or 45+45 in bottles) and allowed to lay eggs for 4 days. Flies were crossed on Thursday, flipped on Monday and virgins collected the following Monday. On Thursday flies were crossed again establishing a 2-week generation cycle. Genetic background was equalized between mutant and WT strains by crossing the mutant lines over double balancer lines where chromosomes were followed with a visible marker. This way crosses were generated in which all chromosomes were replaced with WT chromosomes, except the one carrying the mutation and the respective balancer. Flies from this cross were then crossed with WT, where offspring without the balancer chromosome was used for the hetrozygot mutant experiment. |
| Homo sapiens | SRX2839048 | SRP107326 | 9606 | colon | phenotype: neoplastic | adapter_trimmed | colorectal cancer | NA |
| Homo sapiens | SRX2839045 | SRP107326 | 9606 | colon | phenotype: adjacent normal | adapter_trimmed | colorectal cancer | NA |
| Homo sapiens | SRX2839046 | SRP107326 | 9606 | colon | phenotype: neoplastic | adapter_trimmed | colorectal cancer | NA |
| Homo sapiens | SRX23679521 | SRP490696 | 9606 | Whole Blood | phenotype: At least one warning signs upon clinical evaluation without progression | Illumina | NA | NA |
| Homo sapiens | SRX23679522 | SRP490696 | 9606 | Whole Blood | phenotype: At least one warning signs upon clinical evaluation without progression | Illumina | NA | NA |
| Citrus | SRX8928558 | SRP277135 | 2706 | Juice Sac | cultivar: Hong Ju | Illumina | NA | NA |
| Homo sapiens | SRX23679520 | SRP490696 | 9606 | Whole Blood | phenotype: At least one warning signs upon clinical evaluation without progression | Illumina | NA | NA |
| Citrus | SRX8928559 | SRP277135 | 2706 | Juice Sac | cultivar: Hong Ju | Illumina | NA | NA |