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miSRA: search preprocessed public small-RNA data against your reference sequences (miRNA, tRNA, etc)
ugr
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Name Exp Study TaxonID SampleTag SampleTag2 LibraryInf Disease Method
NA SRX19454453 SRP182908 104179 NA sample_type: Cell culture NEB NA NA
NA SRX19454454 SRP182908 104179 NA sample_type: Cell culture NEB NA NA
NA SRX19454460 SRP182908 104179 NA sample_type: Cell culture NEB NA NA
Homo sapiens SRX7122494 SRP229445 9606 thyroid cancer tissue tissue: thyroid cancer tissue other thyroid cancer NA
Drosophila melanogaster SRX10238584 SRP309293 7227 Testicle\_part\_1 tissue: Testicle_part_1 NEB NA breeding_method: Flies were maintained on standard-diet at 25C. 0-4 days old flies were manually sorted to 15 males and 15 females per vial (or 45+45 in bottles) and allowed to lay eggs for 4 days. Flies were crossed on Thursday, flipped on Monday and virgins collected the following Monday. On Thursday flies were crossed again establishing a 2-week generation cycle. Genetic background was equalized between mutant and WT strains by crossing the mutant lines over double balancer lines where chromosomes were followed with a visible marker. This way crosses were generated in which all chromosomes were replaced with WT chromosomes, except the one carrying the mutation and the respective balancer. Flies from this cross were then crossed with WT, where offspring without the balancer chromosome was used for the hetrozygot mutant experiment.
Drosophila melanogaster SRX10238585 SRP309293 7227 Testicle\_part\_2 tissue: Testicle_part_2 NEB NA breeding_method: Flies were maintained on standard-diet at 25C. 0-4 days old flies were manually sorted to 15 males and 15 females per vial (or 45+45 in bottles) and allowed to lay eggs for 4 days. Flies were crossed on Thursday, flipped on Monday and virgins collected the following Monday. On Thursday flies were crossed again establishing a 2-week generation cycle. Genetic background was equalized between mutant and WT strains by crossing the mutant lines over double balancer lines where chromosomes were followed with a visible marker. This way crosses were generated in which all chromosomes were replaced with WT chromosomes, except the one carrying the mutation and the respective balancer. Flies from this cross were then crossed with WT, where offspring without the balancer chromosome was used for the hetrozygot mutant experiment.
Drosophila melanogaster SRX10238582 SRP309293 7227 Testicle\_part\_2 tissue: Testicle_part_2 NEB NA breeding_method: Flies were maintained on standard-diet at 25C. 0-4 days old flies were manually sorted to 15 males and 15 females per vial (or 45+45 in bottles) and allowed to lay eggs for 4 days. Flies were crossed on Thursday, flipped on Monday and virgins collected the following Monday. On Thursday flies were crossed again establishing a 2-week generation cycle. Genetic background was equalized between mutant and WT strains by crossing the mutant lines over double balancer lines where chromosomes were followed with a visible marker. This way crosses were generated in which all chromosomes were replaced with WT chromosomes, except the one carrying the mutation and the respective balancer. Flies from this cross were then crossed with WT, where offspring without the balancer chromosome was used for the hetrozygot mutant experiment.
Homo sapiens SRX2839049 SRP107326 9606 rectum phenotype: adjacent normal adapter_trimmed colorectal cancer NA
Drosophila melanogaster SRX10238583 SRP309293 7227 Testicle\_part\_3 tissue: Testicle_part_3 NEB NA breeding_method: Flies were maintained on standard-diet at 25C. 0-4 days old flies were manually sorted to 15 males and 15 females per vial (or 45+45 in bottles) and allowed to lay eggs for 4 days. Flies were crossed on Thursday, flipped on Monday and virgins collected the following Monday. On Thursday flies were crossed again establishing a 2-week generation cycle. Genetic background was equalized between mutant and WT strains by crossing the mutant lines over double balancer lines where chromosomes were followed with a visible marker. This way crosses were generated in which all chromosomes were replaced with WT chromosomes, except the one carrying the mutation and the respective balancer. Flies from this cross were then crossed with WT, where offspring without the balancer chromosome was used for the hetrozygot mutant experiment.
Bos taurus SRX6610779 SRP216765 9913 udder cultivar: Ling Chen Illumina NA NA
Drosophila melanogaster SRX10238588 SRP309293 7227 sperm tissue: sperm NEB NA breeding_method: Flies were maintained on standard-diet at 25C. 0-4 days old flies were manually sorted to 15 males and 15 females per vial (or 45+45 in bottles) and allowed to lay eggs for 4 days. Flies were crossed on Thursday, flipped on Monday and virgins collected the following Monday. On Thursday flies were crossed again establishing a 2-week generation cycle. Genetic background was equalized between mutant and WT strains by crossing the mutant lines over double balancer lines where chromosomes were followed with a visible marker. This way crosses were generated in which all chromosomes were replaced with WT chromosomes, except the one carrying the mutation and the respective balancer. Flies from this cross were then crossed with WT, where offspring without the balancer chromosome was used for the hetrozygot mutant experiment.
Homo sapiens SRX23679510 SRP490696 9606 Whole Blood phenotype: Severe symptoms progressed after 14 days of follow-up Illumina NA NA
Drosophila melanogaster SRX10238589 SRP309293 7227 sperm tissue: sperm NEB NA breeding_method: Flies were maintained on standard-diet at 25C. 0-4 days old flies were manually sorted to 15 males and 15 females per vial (or 45+45 in bottles) and allowed to lay eggs for 4 days. Flies were crossed on Thursday, flipped on Monday and virgins collected the following Monday. On Thursday flies were crossed again establishing a 2-week generation cycle. Genetic background was equalized between mutant and WT strains by crossing the mutant lines over double balancer lines where chromosomes were followed with a visible marker. This way crosses were generated in which all chromosomes were replaced with WT chromosomes, except the one carrying the mutation and the respective balancer. Flies from this cross were then crossed with WT, where offspring without the balancer chromosome was used for the hetrozygot mutant experiment.
Homo sapiens SRX23679511 SRP490696 9606 Whole Blood phenotype: Severe symptoms progressed after 14 days of follow-up Illumina NA NA
Drosophila melanogaster SRX10238586 SRP309293 7227 Testicle\_part\_3 tissue: Testicle_part_3 NEB NA breeding_method: Flies were maintained on standard-diet at 25C. 0-4 days old flies were manually sorted to 15 males and 15 females per vial (or 45+45 in bottles) and allowed to lay eggs for 4 days. Flies were crossed on Thursday, flipped on Monday and virgins collected the following Monday. On Thursday flies were crossed again establishing a 2-week generation cycle. Genetic background was equalized between mutant and WT strains by crossing the mutant lines over double balancer lines where chromosomes were followed with a visible marker. This way crosses were generated in which all chromosomes were replaced with WT chromosomes, except the one carrying the mutation and the respective balancer. Flies from this cross were then crossed with WT, where offspring without the balancer chromosome was used for the hetrozygot mutant experiment.