miSRA: search preprocessed public small-RNA data against your reference sequences (miRNA, tRNA, etc)
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| Name | Exp | Study | TaxonID | SampleTag | SampleTag2 | LibraryInf | Disease | Method |
|---|---|---|---|---|---|---|---|---|
| Mus musculus | SRX371681 | SRP032426 | 10090 | Sca1+a7int-cd45-cd31-ter119- sorted cells | cell type: Sca1+a7int-cd45-cd31-ter119- sorted cells | Illumina | NA | NA |
| Homo sapiens | SRX2154252 | SRP078144 | 9606 | PROSTATE | karyotype: This is a hypotetraploid human cell line. The modal chromosome number was 84, occurring in 22% of cells. However, cells with chromosome counts of 86 (20%) and 87 (18%) also occurred at high frequencies. The rate of cells with higher ploidies was 6.0% | Illumina | CARCINOMA | NA |
| Homo sapiens | SRX2154253 | SRP078144 | 9606 | LUNG | karyotype: near diploid | Illumina | NORMAL | NA |
| Homo sapiens | SRX2154258 | SRP078144 | 9606 | PANCREAS | karyotype: This is a pseudodiploid human cell line of male origin with a modal chromosome number of 46 and a low polyploidy rate. Approximately 50% of the cells contained a consistent derivative chromosome 21 with additional material at p12 | Illumina | NORMAL | NA |
| Homo sapiens | SRX2154259 | SRP078144 | 9606 | LUNG | tissue: LUNG | Illumina | ADENOCARCINOMA | NA |
| Homo sapiens | SRX2154256 | SRP078144 | 9606 | COLON | karyotype: modal number = 50; range = 45 to 53 The stemline chromosome number is hyperdiploid with the 2S component occurring at 12% and 11 marker chromosomes were common to S metaphases. One of the 11 markers [7 (7p; 11p)] was disomic., M1 was probably an HSR but the origin of the chromosome could not be identified | Illumina | ADENOCARCINOMA | NA |
| Cenchrus purpureus | SRX25783185 | SRP527675 | 154765 | Stem bud tissue | cultivar: Guiminyin elephant grass | Illumina | NA | NA |
| Mus musculus | SRX371682 | SRP032426 | 10090 | Sca1+a7int-cd45-cd31-ter119- sorted cells | cell type: Sca1+a7int-cd45-cd31-ter119- sorted cells | Illumina | NA | NA |
| Rattus norvegicus | SRX9075468 | SRP280104 | 10116 | Brain | treatment: Casein | Illumina | NA | NA |
| Homo sapiens | SRX2154257 | SRP078144 | 9606 | BREAST | karyotype: This is a pseudo-diploid cell line of female origin with a modal chromosome count of 46 and a low-to-moderate rate of polyploidy. However, even though the line generally has 46 chromosomes per cell, several of those 46 were derivative or marker chromosomes. There were two copies of a karyotypically normal X-chromosome present in 50-60% of the cells. Other features included a normal variation in the heterochromatic region of chromosome 1 (1qh+), a consistent derivative-10 marker chromosome (present in most cells) and 2 other markers: del(3)(p24?) and del(16)(q21~23?) (present in approximately 20-30% of the analyzed cells). Overall, approximately 3-8 marker chromosomes were present in the analyzed metaphase spreads and satellite associations appeared sporadically | Illumina | NORMAL | NA |
| Cenchrus purpureus | SRX25783186 | SRP527675 | 154765 | Stem bud tissue | cultivar: Guiminyin elephant grass | Illumina | NA | NA |
| Mus musculus | SRX371683 | SRP032426 | 10090 | Sca1+a7int-cd45-cd31-ter119- sorted cells | cell type: Sca1+a7int-cd45-cd31-ter119- sorted cells | Illumina | NA | NA |
| Rattus norvegicus | SRX9075469 | SRP280104 | 10116 | Liver | treatment: Casein | Illumina | NA | NA |
| Cenchrus purpureus | SRX25783183 | SRP527675 | 154765 | Stem bud tissue | cultivar: Purple elephant grass | Illumina | NA | NA |
| Cenchrus purpureus | SRX25783184 | SRP527675 | 154765 | Stem bud tissue | cultivar: Guiminyin elephant grass | Illumina | NA | NA |