miSRA: search preprocessed public small-RNA data against your reference sequences (miRNA, tRNA, etc)
miSRAdb automatic annotations
Experiments, taxonID and sample tag are searchable fields
| Name | Exp | Study | TaxonID | SampleTag | SampleTag2 | LibraryInf | Disease | Method |
|---|---|---|---|---|---|---|---|---|
| Humulus lupulus | SRX9175731 | SRP285060 | 3486 | roots | cultivar: Celeia | adapter_trimmed | Verticillium wilt | NA |
| Mus musculus | SRX5315510 | SRP183180 | 10090 | brain, right hemisphere | experimental treatment: none | Illumina | NA | extraction protocol: RNA was collected from whole brain (right hemisphere) using the RNeasy Plus Universal Midi, Mini, and minElute kits for RNA sequencing (Qiagen, Valencia, CA, USA). |
| Arabidopsis thaliana | SRX559591 | SRP042618 | 3702 | seedling | tissue: seedling | Illumina | NA | NA |
| Humulus lupulus | SRX9175730 | SRP285060 | 3486 | roots | cultivar: Celeia | adapter_trimmed | mock-inoculated | NA |
| Arabidopsis thaliana | SRX559590 | SRP042618 | 3702 | seedling | tissue: seedling | Illumina | NA | NA |
| Humulus lupulus | SRX9175736 | SRP285060 | 3486 | roots | cultivar: Wye Target | adapter_trimmed | mock-inoculated | NA |
| Humulus lupulus | SRX9175735 | SRP285060 | 3486 | roots | cultivar: Wye Target | adapter_trimmed | mock-inoculated | NA |
| Rattus norvegicus | SRX8980249 | SRP278288 | 10116 | kidney | tissue: kidney | Illumina | NA | NA |
| Humulus lupulus | SRX9175734 | SRP285060 | 3486 | roots | cultivar: Wye Target | adapter_trimmed | mock-inoculated | NA |
| Rattus norvegicus | SRX8980248 | SRP278288 | 10116 | kidney | tissue: kidney | Illumina | NA | NA |
| Humulus lupulus | SRX9175733 | SRP285060 | 3486 | roots | cultivar: Celeia | adapter_trimmed | Verticillium wilt | NA |
| Rattus norvegicus | SRX8980247 | SRP278288 | 10116 | kidney | tissue: kidney | Illumina | NA | NA |
| Rattus norvegicus | SRX8980246 | SRP278288 | 10116 | kidney | tissue: kidney | Illumina | NA | NA |
| Rattus norvegicus | SRX8980245 | SRP278288 | 10116 | kidney | tissue: kidney | Illumina | NA | NA |
| Rattus norvegicus | SRX8980244 | SRP278288 | 10116 | kidney | tissue: kidney | Illumina | NA | NA |
| Humulus lupulus | SRX9175737 | SRP285060 | 3486 | roots | cultivar: Wye Target | adapter_trimmed | Verticillium wilt | NA |
| Rattus norvegicus | SRX8980254 | SRP278288 | 10116 | kidney | tissue: kidney | Illumina | NA | NA |
| Mus musculus | SRX3816052 | SRP119794 | 10090 | Testis | genotype: Prdm9 KO | NEB | NA | NA |
| Rattus norvegicus | SRX8980253 | SRP278288 | 10116 | kidney | tissue: kidney | Illumina | NA | NA |
| Rattus norvegicus | SRX8980252 | SRP278288 | 10116 | kidney | tissue: kidney | Illumina | NA | NA |
| Rattus norvegicus | SRX8980251 | SRP278288 | 10116 | kidney | tissue: kidney | Illumina | NA | NA |
| Rattus norvegicus | SRX8980250 | SRP278288 | 10116 | kidney | tissue: kidney | Illumina | NA | NA |
| Arabidopsis thaliana | SRX031270 | SRP000248 | 3702 | NA | NA | NEB | NA | NA |
| Mus musculus | SRX3816054 | SRP119794 | 10090 | Testis | genotype: Hop2 KO | NEB | NA | NA |
| Arabidopsis thaliana | SRX559596 | SRP042618 | 3702 | inflorescence | tissue: inflorescence | Illumina | NA | NA |