miSRA: search preprocessed public small-RNA data against your reference sequences (miRNA, tRNA, etc)
ugr
miSRAdb automatic annotations
Experiments, taxonID and sample tag are searchable fields
Name Exp Study TaxonID SampleTag SampleTag2 LibraryInf Disease Method
Caenorhabditis elegans SRX5794964 SRP195498 6239 N2\_gld-1\_edit2\_elution molecule subtype: Pulldown elution; small RNA NEB NA NA
Caenorhabditis elegans SRX5794963 SRP195498 6239 N2\_gld-1\_edit1\_elution molecule subtype: Pulldown elution; small RNA other NA NA
Caenorhabditis elegans SRX5794969 SRP195498 6239 N2\_gld-1\_elution molecule subtype: Pulldown elution; small RNA NEB NA NA
Caenorhabditis elegans SRX5794968 SRP195498 6239 N2\_lin-41\_elution molecule subtype: Pulldown elution; small RNA NEB NA NA
Caenorhabditis elegans SRX5794967 SRP195498 6239 N2\_alg-1\_elution molecule subtype: Pulldown elution; small RNA NEB NA NA
Caenorhabditis elegans SRX5794971 SRP195498 6239 N2\_gld-1\_edit2\_elution molecule subtype: Pulldown elution; small RNA NEB NA NA
Caenorhabditis elegans SRX5794970 SRP195498 6239 N2\_gld-1\_edit1\_elution molecule subtype: Pulldown elution; small RNA other NA NA
Danio rerio SRX10049114 SRP253438 7955 embryo NA NEB NA NA
Danio rerio SRX10049113 SRP253438 7955 mature oocyte NA NEB NA NA
Bos taurus SRX374787 SRP032788 9913 Rumen tissue: Rumen Illumina NA NA
Caenorhabditis elegans SRX5794959 SRP195498 6239 N2\_gfp\_elution molecule subtype: Pulldown elution; small RNA other NA NA
Caenorhabditis elegans SRX5794958 SRP195498 6239 N2\_gfp\_elution molecule subtype: Pulldown elution; small RNA other NA NA
Caenorhabditis elegans SRX5794957 SRP195498 6239 gfp::lin-41\_elution molecule subtype: Pulldown elution; small RNA other NA NA
Caenorhabditis elegans SRX5794956 SRP195498 6239 gld-1::gfp\_elution molecule subtype: Pulldown elution; small RNA other NA NA
Oryza sativa Japonica Group SRX3513472 SRP127576 39947 12 day seedling genotype/variation: wild type adapter_trimmed NA NA
Oryza sativa Japonica Group SRX3513471 SRP127576 39947 12 day seedling genotype/variation: ddm1a/1b adapter_trimmed NA NA
Danio rerio SRX10049118 SRP253438 7955 embryo NA NEB NA NA
Danio rerio SRX10049117 SRP253438 7955 embryo NA NEB NA NA
Danio rerio SRX10049116 SRP253438 7955 embryo NA NEB NA NA
Danio rerio SRX10049115 SRP253438 7955 embryo NA NEB NA NA
Homo sapiens SRX012263 SRP001313 9606 MDA231 cell line: MDA231 Illumina_2 NA NA
Homo sapiens SRX012262 SRP001313 9606 MCF7 cell line: MCF7 Illumina_2 NA NA
Homo sapiens SRX012261 SRP001313 9606 DLD2 cell line: DLD2 Illumina_2 NA NA
Homo sapiens SRX012260 SRP001313 9606 SW480 cell line: SW480 Illumina_2 NA NA
Caenorhabditis elegans SRX5794962 SRP195498 6239 N2\_gld-1\_elution molecule subtype: Pulldown elution; small RNA NEB NA NA