miSRA: search preprocessed public small-RNA data against your reference sequences (miRNA, tRNA, etc)
ugr
miSRAdb automatic annotations
Experiments, taxonID and sample tag are searchable fields
Name Exp Study TaxonID SampleTag SampleTag2 LibraryInf Disease Method
Homo sapiens SRX12777230 SRP343188 9606 plasma NA Qiagen_UMI NA NA
Homo sapiens SRX21232322 SRP453103 9606 whole blood tissue: whole blood Illumina pCHIKV-CIJD NA
Homo sapiens SRX12777231 SRP343188 9606 plasma NA Qiagen_UMI NA NA
Homo sapiens SRX21232323 SRP453103 9606 whole blood tissue: whole blood Illumina non-pCHIKV-CIJD NA
Homo sapiens SRX21232320 SRP453103 9606 whole blood tissue: whole blood Illumina pCHIKV-CIJD NA
Homo sapiens SRX21232321 SRP453103 9606 whole blood tissue: whole blood Illumina pCHIKV-CIJD NA
Homo sapiens SRX21232319 SRP453103 9606 whole blood tissue: whole blood Illumina pCHIKV-CIJD NA
Homo sapiens SRX21232317 SRP453103 9606 whole blood tissue: whole blood Illumina pCHIKV-CIJD NA
Homo sapiens SRX21232318 SRP453103 9606 whole blood tissue: whole blood Illumina pCHIKV-CIJD NA
Arabidopsis thaliana SRX3157157 SRP117050 3702 12-day-old seedlings tissue: 12-day-old seedlings NEB NA NA
Arabidopsis thaliana SRX3157158 SRP117050 3702 12-day-old seedlings tissue: 12-day-old seedlings NEB NA NA
Arabidopsis thaliana SRX3157156 SRP117050 3702 12-day-old seedlings tissue: 12-day-old seedlings NEB NA NA
Arabidopsis thaliana SRX3157159 SRP117050 3702 12-day-old seedlings tissue: 12-day-old seedlings NEB NA NA
Homo sapiens SRX21232315 SRP453103 9606 whole blood tissue: whole blood Illumina pCHIKV-CIJD NA
Homo sapiens SRX21232316 SRP453103 9606 whole blood tissue: whole blood Illumina pCHIKV-CIJD NA
Homo sapiens SRX12008400 SRP335559 9606 HEK293T genotype/replicate: TKO_replicate_1 Qiagen_UMI NA NA
Homo sapiens SRX12008401 SRP335559 9606 HEK293T genotype/replicate: TKO_replicate_2 Qiagen_UMI NA NA
Oncorhynchus mykiss ERX11400108 ERP150939 8022 NA NA NEB NA pool creation protocol: https://data.faang.org/api/fire_api/experiments/ROSLIN_SOP_RNAseq_protocol_20210527.pdf
Oncorhynchus mykiss ERX11400109 ERP150939 8022 NA NA NEB NA pool creation protocol: https://data.faang.org/api/fire_api/experiments/ROSLIN_SOP_RNAseq_protocol_20210527.pdf
Oncorhynchus mykiss ERX11400102 ERP150939 8022 NA NA NEB NA pool creation protocol: https://data.faang.org/api/fire_api/experiments/ROSLIN_SOP_RNAseq_protocol_20210527.pdf
Homo sapiens SRX14071705 SRP358691 9606 LNCaP cell type: Human Lymph Node Carcinoma of the prostate NEB NA NA
Oncorhynchus mykiss ERX11400103 ERP150939 8022 NA NA NEB NA pool creation protocol: https://data.faang.org/api/fire_api/experiments/ROSLIN_SOP_RNAseq_protocol_20210527.pdf
Oncorhynchus mykiss ERX11400100 ERP150939 8022 NA NA NEB NA pool creation protocol: https://data.faang.org/api/fire_api/experiments/ROSLIN_SOP_RNAseq_protocol_20210527.pdf
Homo sapiens SRX14071703 SRP358691 9606 LNCaP cell type: Human Lymph Node Carcinoma of the prostate NEB NA NA
Oncorhynchus mykiss ERX11400101 ERP150939 8022 NA NA NEB NA pool creation protocol: https://data.faang.org/api/fire_api/experiments/ROSLIN_SOP_RNAseq_protocol_20210527.pdf