miSRA: search preprocessed public small-RNA data against your reference sequences (miRNA, tRNA, etc)
ugr
miSRAdb automatic annotations
Experiments, taxonID and sample tag are searchable fields
Name Exp Study TaxonID SampleTag SampleTag2 LibraryInf Disease Method
Capsicum annuum SRX248839 SRP019257 4072 Stems tissue: Stems Illumina_2 NA NA
Mus musculus SRX669888 SRP045287 10090 1-cell stage embryo tissue: 1-cell stage embryo Illumina NA NA
Rattus norvegicus SRX7582342 SRP243061 10116 bone marrow tissue: bone marrow NEB NA NA
Rattus norvegicus SRX7582343 SRP243061 10116 bone marrow tissue: bone marrow NEB NA NA
Mus musculus SRX669886 SRP045287 10090 1-cell stage embryo tissue: 1-cell stage embryo Illumina NA NA
NA SRX018650 SRP002205 36080 fungus grown on plate (YPG media, pH:4.5; 48hours) genotype: dcl1 dcl2 double mutant Illumina_2 NA NA
Mus musculus SRX669887 SRP045287 10090 1-cell stage embryo tissue: 1-cell stage embryo Illumina NA NA
Mus musculus SRX669884 SRP045287 10090 oocyte tissue: oocyte Illumina NA NA
Mus musculus SRX669885 SRP045287 10090 1-cell stage embryo tissue: 1-cell stage embryo Illumina NA NA
Mus musculus SRX669882 SRP045287 10090 sperm tissue: sperm Illumina NA NA
Mus musculus SRX669883 SRP045287 10090 oocyte tissue: oocyte Illumina NA NA
Mus musculus SRX669881 SRP045287 10090 sperm tissue: sperm Illumina NA NA
Rattus norvegicus SRX7582340 SRP243061 10116 bone marrow tissue: bone marrow NEB NA NA
Rattus norvegicus SRX7582341 SRP243061 10116 bone marrow tissue: bone marrow NEB NA NA
NA SRX018646 SRP002205 36080 dcl1- fungus grown on plate (YPG media, pH:4.5; 48hours) genotype: dcl1 mutant Illumina_2 NA NA
NA SRX018647 SRP002205 36080 dcl2- fungus grown on plate (YPG media, pH:4.5; 48hours) genotype: dcl2 mutant Illumina_2 NA NA
Rattus norvegicus SRX7582338 SRP243061 10116 bone marrow tissue: bone marrow NEB NA NA
NA SRX018645 SRP002205 36080 wildtype fungus grown on plate (YPG media, pH:4.5; 48hours) genotype: wild type Illumina_2 NA NA
NA SRX018648 SRP002205 36080 rdr1- fungus grown on plate (YPG media, pH:4.5; 48hours) genotype: rdr1 mutant Illumina_2 NA NA
NA SRX018649 SRP002205 36080 rdr2- fungus grown on plate (YPG media, pH:4.5; 48hours) genotype: rdr2 mutant Illumina_2 NA NA
Rattus norvegicus SRX7582339 SRP243061 10116 bone marrow tissue: bone marrow NEB NA NA
Caenorhabditis elegans SRX2398203 SRP094620 6239 embryo genotype: eri-1(mg366);3xflag::gfp::nrde-3 adapter_trimmed NA NA
Caenorhabditis elegans SRX2398204 SRP094620 6239 embryo genotype: eri-1(mg366);3xflag::gfp::nrde-3 adapter_trimmed NA NA
Caenorhabditis elegans SRX2398201 SRP094620 6239 embryo genotype: eri-1(mg366);3xflag::gfp::nrde-3 adapter_trimmed NA NA
Caenorhabditis elegans SRX2398202 SRP094620 6239 embryo genotype: eri-1(mg366);3xflag::gfp::nrde-3 adapter_trimmed NA NA