miSRA: search preprocessed public small-RNA data against your reference sequences (miRNA, tRNA, etc)
ugr
miSRAdb automatic annotations
Experiments, taxonID and sample tag are searchable fields
Name Exp Study TaxonID SampleTag SampleTag2 LibraryInf Disease Method
Homo sapiens SRX9344660 SRP288162 9606 Primary tumor Leiomyosarcoma molecule subtype: small RNA adapter_trimmed NA NA
Homo sapiens ERX3519164 ERP117029 9606 mononuclear cell INSDC status: public Illumina HIV-1 infection NA
Homo sapiens ERX3519165 ERP117029 9606 mononuclear cell INSDC status: public Illumina HIV-1 infection NA
Homo sapiens ERX3519162 ERP117029 9606 mononuclear cell INSDC status: public Illumina HIV-1 infection NA
Homo sapiens ERX3519163 ERP117029 9606 mononuclear cell INSDC status: public Illumina HIV-1 infection NA
Zea mays SRX3124513 SRP116089 4577 leaf copy number of transgene: single copy Illumina NA NA
Mus musculus SRX7141453 SRP054244 10090 whole testis tissue: whole testis Illumina NA NA
Drosophila melanogaster SRX8718690 SRP271550 7227 Adult midgut genotype: wild type Illumina NA NA
Zea mays SRX3124514 SRP116089 4577 leaf copy number of transgene: single copy Illumina NA NA
Mus musculus SRX7141454 SRP054244 10090 whole testis tissue: whole testis Illumina NA NA
Drosophila melanogaster SRX8718691 SRP271550 7227 Adult midgut genotype: wild type Illumina NA NA
Mus musculus SRX7141451 SRP054244 10090 whole testis tissue: whole testis Illumina NA NA
Mus musculus SRX7141452 SRP054244 10090 whole testis tissue: whole testis Illumina NA NA
Homo sapiens ERX3519160 ERP117029 9606 mononuclear cell INSDC status: public Illumina HIV-1 infection NA
Homo sapiens ERX3519161 ERP117029 9606 mononuclear cell INSDC status: public Illumina HIV-1 infection NA
Homo sapiens SRX10086644 SRP306201 9606 testis karyotype: 46,XY NEB NA NA
Mus musculus SRX7141455 SRP054244 10090 whole testis tissue: whole testis Illumina NA NA
Homo sapiens SRX10086645 SRP306201 9606 testis karyotype: 46,XY NEB NA NA
Arabidopsis thaliana SRX8718699 SRP271551 3702 seedlings ecotype: Col0 NEB NA NA
Dicentrarchus labrax ERX10379698 ERP145350 13489 NA post-hatching water temperature average: 15.0 NEB NA specimen collection protocol: https://data.faang.org/api/fire_api/samples/UNIPD_SOP_Embryos%20Sampling%20for%20Isolation%20of%20Small%20and%20Large%20RNA_Dlab_20201012.pdf
Dicentrarchus labrax ERX10379699 ERP145350 13489 NA post-hatching water temperature average: 15.0 NEB NA specimen collection protocol: https://data.faang.org/api/fire_api/samples/UNIPD_SOP_Embryos%20Sampling%20for%20Isolation%20of%20Small%20and%20Large%20RNA_Dlab_20201012.pdf
Dicentrarchus labrax ERX10379696 ERP145350 13489 NA post-hatching water temperature average: 15.0 NEB NA specimen collection protocol: https://data.faang.org/api/fire_api/samples/UNIPD_SOP_Embryos%20Sampling%20for%20Isolation%20of%20Small%20and%20Large%20RNA_Dlab_20201012.pdf
Drosophila melanogaster SRX8718692 SRP271550 7227 Adult midgut genotype: wild type Illumina NA NA
Dicentrarchus labrax ERX10379697 ERP145350 13489 NA post-hatching water temperature average: 15.0 NEB NA specimen collection protocol: https://data.faang.org/api/fire_api/samples/UNIPD_SOP_Embryos%20Sampling%20for%20Isolation%20of%20Small%20and%20Large%20RNA_Dlab_20201012.pdf
Dicentrarchus labrax ERX10379694 ERP145350 13489 NA post-hatching water temperature average: 15.0 NEB NA specimen collection protocol: https://data.faang.org/api/fire_api/samples/UNIPD_SOP_Embryos%20Sampling%20for%20Isolation%20of%20Small%20and%20Large%20RNA_Dlab_20201012.pdf