miSRA: search preprocessed public small-RNA data against your reference sequences (miRNA, tRNA, etc)
miSRAdb automatic annotations
Experiments, taxonID and sample tag are searchable fields
| Name | Exp | Study | TaxonID | SampleTag | SampleTag2 | LibraryInf | Disease | Method |
|---|---|---|---|---|---|---|---|---|
| Ipomoea batatas | SRX8841375 | SRP274034 | 4120 | Leaf | cultivar: Beauregard | NEB | NA | NA |
| Ipomoea batatas | SRX8841372 | SRP274034 | 4120 | Leaf | cultivar: Beauregard | NEB | NA | NA |
| Ipomoea batatas | SRX8841378 | SRP274034 | 4120 | Leaf | cultivar: Beauregard | NEB | NA | NA |
| Ipomoea batatas | SRX8841379 | SRP274034 | 4120 | Leaf | cultivar: Beauregard | NEB | NA | NA |
| Ipomoea batatas | SRX8841376 | SRP274034 | 4120 | Leaf | cultivar: Beauregard | NEB | NA | NA |
| Ipomoea batatas | SRX8841377 | SRP274034 | 4120 | Leaf | cultivar: Beauregard | NEB | NA | NA |
| Bemisia tabaci | SRX9529682 | SRP292262 | 7038 | wholebody | tissue: wholebody | NEB | NA | NA |
| Helianthus annuus | SRX2344589 | SRP093222 | 4232 | NA | Genotype: SF193 | Illumina | NA | Extract_protocol: Total RNA was extracted using QIAzol Lysis Reagent following the manufacturer s instructions (Qiagen, Dusseldorf, Germany). Equal amounts of total RNA were pooled from bract, ray floret ligule (including the tube and lamina), disc floret corolla (including the tube and the non-developed lamina), ovary (from either ray or disk florets), pistil (pooled stigmas and styles), stamen (pooled anthers and filaments), pollen, leaves (from hydronical experiments control conditions from Marchand et al., 2013) and roots (from hydronical experiments control conditions). |
| Homo sapiens | SRX11169115 | SRP013565 | 9606 | left colon | tissue: left colon | other | NA | NA |
| Ipomoea batatas | SRX8841381 | SRP274034 | 4120 | Leaf | cultivar: Beauregard | NEB | NA | NA |
| Ipomoea batatas | SRX8841382 | SRP274034 | 4120 | Leaf | cultivar: Beauregard | NEB | NA | NA |
| Ipomoea batatas | SRX8841380 | SRP274034 | 4120 | Leaf | cultivar: Beauregard | NEB | NA | NA |
| Ipomoea batatas | SRX8841385 | SRP274034 | 4120 | Leaf | cultivar: Beauregard | NEB | NA | NA |
| Ipomoea batatas | SRX8841386 | SRP274034 | 4120 | Leaf | cultivar: Beauregard | NEB | NA | NA |
| Ipomoea batatas | SRX8841383 | SRP274034 | 4120 | Leaf | cultivar: Beauregard | NEB | NA | NA |
| Rattus norvegicus | ERX2279832 | ERP105822 | 10116 | central nervous system | tissue type: central nervous system | adapter_trimmed | NA | NA |
| Homo sapiens | SRX9324957 | SRP287975 | 9606 | sperm | NA | NEB | NA | NA |
| Rattus norvegicus | ERX2279833 | ERP105822 | 10116 | central nervous system | tissue type: central nervous system | adapter_trimmed | NA | NA |
| Homo sapiens | SRX11149880 | SRP324141 | 9606 | EDTA Platelet Depleted Plasma | molecule subtype: microRNA | other | NA | NA |
| Homo sapiens | SRX9324958 | SRP287975 | 9606 | sperm | NA | NEB | NA | NA |
| Rattus norvegicus | ERX2279830 | ERP105822 | 10116 | central nervous system | tissue type: central nervous system | adapter_trimmed | NA | NA |
| Homo sapiens | SRX9324955 | SRP287975 | 9606 | sperm | NA | NEB | NA | NA |
| Rattus norvegicus | ERX2279831 | ERP105822 | 10116 | central nervous system | tissue type: central nervous system | adapter_trimmed | NA | NA |
| Homo sapiens | SRX9324956 | SRP287975 | 9606 | sperm | NA | NEB | NA | NA |
| Rattus norvegicus | ERX2279836 | ERP105822 | 10116 | central nervous system | tissue type: central nervous system | adapter_trimmed | NA | NA |