miSRA: search preprocessed public small-RNA data against your reference sequences (miRNA, tRNA, etc)
ugr
miSRAdb automatic annotations
Experiments, taxonID and sample tag are searchable fields
Name Exp Study TaxonID SampleTag SampleTag2 LibraryInf Disease Method
Homo sapiens SRX18426199 SRP410343 9606 lung tissue: lung Illumina NA NA
NA SRX2080327 SRP083943 12216 inoculum host_tissue_sampled: inoculum Illumina NA NA
Homo sapiens SRX2995944 SRP111544 9606 Human Embryonic kidney cell line: 293T (pool of 3 KO clones) Illumina infection: Infected with pTIP-shL3; 100ng/uL doxycycline NA
Arabidopsis thaliana SRX18426196 SRP410348 3702 seeding ecotype: Columbia NEB NA NA
NA SRX2080324 SRP083943 12216 leaf tissue host_tissue_sampled: leaf tissue Illumina NA NA
Arabidopsis thaliana SRX18426197 SRP410348 3702 seeding ecotype: Columbia NEB NA NA
NA SRX2080325 SRP083943 12216 leaf tissue host_tissue_sampled: leaf tissue Illumina NA NA
NA SRX2080322 SRP083943 12216 inoculum host_tissue_sampled: inoculum Illumina NA NA
Arabidopsis thaliana SRX18426195 SRP410348 3702 seeding ecotype: Columbia NEB NA NA
NA SRX2080323 SRP083943 12216 leaf tissue host_tissue_sampled: leaf tissue Illumina NA NA
NA SRX2080320 SRP083943 12216 leaf tissue host_tissue_sampled: leaf tissue Illumina NA NA
NA SRX2080321 SRP083943 12216 inoculum host_tissue_sampled: inoculum Illumina NA NA
Cicer arietinum SRX5865900 SRP198927 3827 Leaf genotype: Himchana 1 Illumina NA NA
Cicer arietinum SRX5865901 SRP198927 3827 Leaf genotype: Himchana 1 Illumina NA NA
Octopus vulgaris SRX13497382 SRP352299 6645 Skin tissue: Skin other NA extract_protocol: SMARTer smRNA-Seq
Octopus vulgaris SRX13497383 SRP352299 6645 Retina tissue: Retina other NA extract_protocol: SMARTer smRNA-Seq
Octopus vulgaris SRX13497380 SRP352299 6645 Axial Nerve Cord tissue: Axial Nerve Cord other NA extract_protocol: SMARTer smRNA-Seq
Octopus vulgaris SRX13497381 SRP352299 6645 Vertical lobe tissue: Vertical lobe other NA extract_protocol: SMARTer smRNA-Seq
Octopus vulgaris SRX13497386 SRP352299 6645 Pedunculate & Olfactory lobe tissue: Pedunculate & Olfactory lobe other NA extract_protocol: SMARTer smRNA-Seq
Homo sapiens SRX2995938 SRP111544 9606 Human Embryonic kidney cell line: 293T (pool of 3 KO clones) Illumina infection: Infected with pTIP-scr; 100ng/uL doxycycline NA
Octopus vulgaris SRX13497387 SRP352299 6645 Central heart tissue: Central heart other NA extract_protocol: SMARTer smRNA-Seq
Homo sapiens SRX2995939 SRP111544 9606 Human Embryonic kidney cell line: 293T (pool of 3 KO clones) Illumina infection: Infected with pTIP-shL3; 100ng/uL doxycycline NA
Octopus vulgaris SRX13497384 SRP352299 6645 White body tissue: White body other NA extract_protocol: SMARTer smRNA-Seq
Drosophila melanogaster SRX5635804 SRP190839 7227 ovarian somatic cells (OSC) tissue: ovarian somatic cells (OSC) NEB NA NA
Octopus vulgaris SRX13497385 SRP352299 6645 Sucker small tissue: Sucker small other NA extract_protocol: SMARTer smRNA-Seq