miSRA: search preprocessed public small-RNA data against your reference sequences (miRNA, tRNA, etc)
ugr
miSRAdb automatic annotations
Experiments, taxonID and sample tag are searchable fields
Name Exp Study TaxonID SampleTag SampleTag2 LibraryInf Disease Method
Homo sapiens SRX518938 SRP041231 9606 293T cell line: 293T Illumina NA NA
Caenorhabditis elegans SRX16367750 SRP387320 6239 Whole worm genotype: prg-1 (tm872) NEB NA NA
Caenorhabditis elegans SRX16367751 SRP387320 6239 Whole worm genotype: rde-1 (ne219) NEB NA NA
Ovis aries ERX3373324 ERP115583 9940 NA INSDC status: public Illumina NA NA
Ovis aries ERX3373325 ERP115583 9940 NA INSDC status: public Illumina NA NA
Ovis aries ERX3373322 ERP115583 9940 NA INSDC status: public Illumina NA NA
Homo sapiens SRX518939 SRP041231 9606 293T cell line: 293T Illumina NA NA
Ovis aries ERX3373323 ERP115583 9940 NA INSDC status: public Illumina NA NA
Ovis aries ERX3373328 ERP115583 9940 NA INSDC status: public Illumina NA NA
Caenorhabditis elegans SRX16367749 SRP387320 6239 Whole worm genotype: ppw-2 (tm1120) NEB NA NA
Gallus gallus SRX661178 SRP044805 9031 small intestine tissue: small intestine adapter_trimmed infection: infected NA
Ovis aries ERX3373329 ERP115583 9940 NA INSDC status: public Illumina NA NA
Gallus gallus SRX661179 SRP044805 9031 small intestine tissue: small intestine adapter_trimmed infection: infected NA
Ovis aries ERX3373326 ERP115583 9940 NA INSDC status: public Illumina NA NA
Caenorhabditis elegans SRX16367747 SRP387320 6239 Whole worm genotype: nrde-3 (tm1116) NEB NA NA
Gallus gallus SRX661176 SRP044805 9031 small intestine tissue: small intestine adapter_trimmed infection: non-infected NA
Ovis aries ERX3373327 ERP115583 9940 NA INSDC status: public Illumina NA NA
Caenorhabditis elegans SRX16367748 SRP387320 6239 Whole worm genotype: ppw-1 (tm914) NEB NA NA
Gallus gallus SRX661177 SRP044805 9031 small intestine tissue: small intestine adapter_trimmed infection: non-infected NA
Caenorhabditis elegans SRX16367745 SRP387320 6239 Whole worm genotype: hrde-1 (tm1200) NEB NA NA
Caenorhabditis elegans SRX16367746 SRP387320 6239 Whole worm genotype: wild-type NEB NA NA
Caenorhabditis elegans SRX16367743 SRP387320 6239 Whole worm genotype: avr-14(ad1305) I;avr-15(vu227)glc-1(pk54) V. NEB NA NA
Caenorhabditis elegans SRX16367744 SRP387320 6239 Whole worm genotype: ergo-1 (tm1860) NEB NA NA
Gallus gallus SRX661175 SRP044805 9031 small intestine tissue: small intestine adapter_trimmed infection: non-infected NA
Mus musculus SRX5141275 SRP100557 10090 mouse testis molecule subtype: small RNA in length of 17-40 nt Illumina_2 NA library construction method: CAS-seq