miSRA: search preprocessed public small-RNA data against your reference sequences (miRNA, tRNA, etc)
ugr
miSRAdb automatic annotations
Experiments, taxonID and sample tag are searchable fields
Name Exp Study TaxonID SampleTag SampleTag2 LibraryInf Disease Method
Homo sapiens SRX5141237 SRP100557 9606 human morula embryo molecule subtype: small RNA in length of 17-40 nt Illumina NA library construction method: CAS-seq
Homo sapiens SRX5141238 SRP100557 9606 human morula embryo molecule subtype: small RNA in length of 17-40 nt Illumina NA library construction method: CAS-seq
Echinochloa crus-galli var. zelayensis SRX12027676 SRP335934 2053281 Leaves and stems cultivar: Echinochloa crus-galli var. zelayensis Illumina NA NA
Homo sapiens SRX5141235 SRP100557 9606 human 2cell embryo molecule subtype: small RNA in length of 17-40 nt Illumina NA library construction method: CAS-seq
Echinochloa crus-galli var. zelayensis SRX12027677 SRP335934 2053281 Leaves and stems cultivar: Echinochloa crus-galli var. zelayensis Illumina NA NA
Homo sapiens SRX5141236 SRP100557 9606 human morula embryo molecule subtype: small RNA in length of 17-40 nt Illumina NA library construction method: CAS-seq
Echinochloa crus-galli var. zelayensis SRX12027674 SRP335934 2053281 Leaves and stems cultivar: Echinochloa crus-galli var. zelayensis Illumina NA NA
Homo sapiens SRX5141233 SRP100557 9606 human 2cell embryo molecule subtype: small RNA in length of 17-40 nt Illumina NA library construction method: CAS-seq
Echinochloa crus-galli var. zelayensis SRX12027675 SRP335934 2053281 Leaves and stems cultivar: Echinochloa crus-galli var. zelayensis Illumina NA NA
Rattus norvegicus SRX1079415 SRP058705 10116 Tuberal hypothalamus tissue: Tuberal hypothalamus adapter_trimmed NA breeding_method: natural; Wistar virgin femaales of 8 weeks and males of 12 weeks were caged in collective cages for mating. Day 1 of pregnancy was identified by the presence of spermatozoa on vaginal frottis
Homo sapiens SRX518940 SRP041231 9606 293T cell line: 293T Illumina NA NA
Rattus norvegicus SRX1079416 SRP058705 10116 Tuberal hypothalamus tissue: Tuberal hypothalamus adapter_trimmed NA breeding_method: natural; Wistar virgin femaales of 8 weeks and males of 12 weeks were caged in collective cages for mating. Day 1 of pregnancy was identified by the presence of spermatozoa on vaginal frottis
Homo sapiens SRX518941 SRP041231 9606 293T cell line: 293T Illumina NA NA
Rattus norvegicus SRX1079413 SRP058705 10116 Tuberal hypothalamus tissue: Tuberal hypothalamus adapter_trimmed NA breeding_method: natural; Wistar virgin femaales of 8 weeks and males of 12 weeks were caged in collective cages for mating. Day 1 of pregnancy was identified by the presence of spermatozoa on vaginal frottis
Rattus norvegicus SRX1079414 SRP058705 10116 Tuberal hypothalamus tissue: Tuberal hypothalamus adapter_trimmed NA breeding_method: natural; Wistar virgin femaales of 8 weeks and males of 12 weeks were caged in collective cages for mating. Day 1 of pregnancy was identified by the presence of spermatozoa on vaginal frottis
Mus musculus SRX3236444 SRP119238 10090 ovaries tissue: ovaries NEB NA NA
Homo sapiens SRX1079411 SRP060236 9606 Hep3B-C cell type: hepatic cancer stem cells Illumina_2 NA NA
Homo sapiens SRX1079412 SRP060236 9606 Huh7-C cell type: hepatic cancer stem cells other NA NA
Homo sapiens SRX518942 SRP041231 9606 293T cell line: 293T Illumina NA NA
Homo sapiens SRX1079410 SRP060236 9606 Huh7 cell type: hepatoma cell line other NA NA
Ovis aries ERX3373331 ERP115583 9940 NA INSDC status: public Illumina NA NA
Caenorhabditis elegans SRX16367763 SRP387320 6239 Whole worm genotype: avr-14(ad1305) I;avr-15(vu227)glc-1(pk54) V. NEB NA NA
Ovis aries ERX3373332 ERP115583 9940 NA INSDC status: public Illumina NA NA
Caenorhabditis elegans SRX16367764 SRP387320 6239 Whole worm genotype: ergo-1 (tm1860) NEB NA NA
Caenorhabditis elegans SRX16367761 SRP387320 6239 Whole worm genotype: wago-4 (tm1019) NEB NA NA