miSRA: search preprocessed public small-RNA data against your reference sequences (miRNA, tRNA, etc)
ugr
miSRAdb automatic annotations
Experiments, taxonID and sample tag are searchable fields
Name Exp Study TaxonID SampleTag SampleTag2 LibraryInf Disease Method
Homo sapiens SRX6092741 SRP201819 9606 adjacent normal liver tissue tissue: adjacent normal liver tissue Illumina NA NA
Caenorhabditis elegans SRX9904357 SRP302585 6239 Young adult animals genotype: kstSi4[Pmex-5::ceGFP::tbb-2; cbr-unc-119(+)] II; unc-119(ed3)III; kstEx28 [21ur-199 anti-random DNA + Pmyo-2::mCherry + Prps-27::hygromycinR] NEB NA rna-seq method: Ligation-based sRNA-seq, 5-linker ligation is dependent of the 5-mono phosphate of the small RNAs
Homo sapiens SRX6092742 SRP201819 9606 hepatoblastoma tissue: hepatoblastoma Illumina NA NA
Caenorhabditis elegans SRX9904358 SRP302585 6239 Young adult animals genotype: kstSi4[Pmex-5::ceGFP::tbb-2; cbr-unc-119(+)] II; unc-119(ed3)III; kstEx29 [21ur-1224 mod_him-5 + 21ur-1224_mod_mCherry + 21ur-1224- anti-ceGFP + 21ur-199 anti-oma-1 + Pmyo-2::mCherry + Prps-27::hygromycinR] other NA rna-seq method: Ligation-based sRNA-seq, 5-linker ligation is dependent of the 5-mono phosphate of the small RNAs
Arabidopsis thaliana SRX1868688 SRP076861 3702 shoot molecule subtype: small RNA NEB NA NA
Arabidopsis thaliana SRX1868689 SRP076861 3702 shoot molecule subtype: small RNA NEB NA NA
Arabidopsis thaliana SRX1868686 SRP076861 3702 shoot molecule subtype: small RNA NEB NA NA
NA SRX7438533 SRP238705 10114 spinal cord tissue: spinal cord NEB NA NA
Arabidopsis thaliana SRX1868687 SRP076861 3702 shoot molecule subtype: small RNA NEB NA NA
NA SRX7438531 SRP238705 10114 spinal cord tissue: spinal cord NEB NA NA
NA SRX7438532 SRP238705 10114 spinal cord tissue: spinal cord NEB NA NA
NA SRX7438530 SRP238705 10114 spinal cord tissue: spinal cord NEB NA NA
Homo sapiens SRX6092750 SRP201819 9606 hepatoblastoma tissue: hepatoblastoma Illumina NA NA
Caenorhabditis elegans SRX9904344 SRP302585 6239 Young adult animals genotype: kstEx4 [21ur-199 anti-oma-1+Pmyo-2::mCherry+Prps-17::hygromycinR] NEB NA rna-seq method: Ligation-based sRNA-seq, 5-linker ligation is independent of the 5-mono phosphate of the small RNAs
Homo sapiens SRX6092751 SRP201819 9606 adjacent normal liver tissue tissue: adjacent normal liver tissue Illumina NA NA
Caenorhabditis elegans SRX9904345 SRP302585 6239 Young adult animals genotype: kstEx5 [21ur-199 anti-oma-1+Pmyo-2::mCherry+Prps-17::hygromycinR] NEB NA rna-seq method: Ligation-based sRNA-seq, 5-linker ligation is independent of the 5-mono phosphate of the small RNAs
Caenorhabditis elegans SRX9904348 SRP302585 6239 Young adult animals genotype: kstEx4 [21ur-199 anti-oma-1+Pmyo-2::mCherry+Prps-17::hygromycinR] other NA rna-seq method: Ligation-based sRNA-seq, 5-linker ligation is dependent of the 5-mono phosphate of the small RNAs
Caenorhabditis elegans SRX9904349 SRP302585 6239 Young adult animals genotype: kstEx5 [21ur-199 anti-oma-1+Pmyo-2::mCherry+Prps-17::hygromycinR] NEB NA rna-seq method: Ligation-based sRNA-seq, 5-linker ligation is dependent of the 5-mono phosphate of the small RNAs
NA SRX7438528 SRP238705 10114 spinal cord tissue: spinal cord NEB NA NA
Caenorhabditis elegans SRX9904346 SRP302585 6239 Young adult animals genotype: kstEx7[21ur-199 anti unc-119+Pmyo-2::mCherry+Prps-27::hygromycinR] other NA rna-seq method: Ligation-based sRNA-seq, 5-linker ligation is dependent of the 5-mono phosphate of the small RNAs
NA SRX7438529 SRP238705 10114 spinal cord tissue: spinal cord NEB NA NA
Caenorhabditis elegans SRX9904347 SRP302585 6239 Young adult animals genotype: kstEx9[21ur-199 anti unc-119+Pmyo-2::mCherry+Prps-27::hygromycinR] NEB NA rna-seq method: Ligation-based sRNA-seq, 5-linker ligation is dependent of the 5-mono phosphate of the small RNAs
Mus musculus SRX9674184 SRP297669 10090 CD4 T-cells tissue: CD4 T-cells NEB NA NA
Mus musculus SRX9674188 SRP297669 10090 CD4 T-cells tissue: CD4 T-cells NEB NA NA
Mus musculus SRX9674189 SRP297669 10090 CD4 T-cells tissue: CD4 T-cells NEB NA NA