miSRA: search preprocessed public small-RNA data against your reference sequences (miRNA, tRNA, etc)
ugr
miSRAdb automatic annotations
Experiments, taxonID and sample tag are searchable fields
Name Exp Study TaxonID SampleTag SampleTag2 LibraryInf Disease Method
Mus musculus SRX2877274 SRP108509 10090 Liver tissue NA NEB NA NA
Homo sapiens SRX1868582 SRP076854 9606 muscle tissue: muscle Illumina_2 rhabdomyosarcoma NA
Mus musculus SRX2877275 SRP108509 10090 Liver tissue NA NEB NA NA
Homo sapiens SRX1868580 SRP076854 9606 muscle tissue: muscle Illumina_2 rhabdomyosarcoma NA
Mus musculus SRX2877278 SRP108509 10090 Liver tissue NA NEB NA NA
Mus musculus SRX2877279 SRP108509 10090 Liver tissue NA NEB NA NA
Solanum pimpinellifolium SRX3793096 SRP135718 4084 Fruits cultivar: BGV006370 NEB NA NA
Solanum pimpinellifolium SRX3793097 SRP135718 4084 Fruits cultivar: BGV006370 NEB NA NA
Solanum lycopersicum SRX3793094 SRP135718 4081 Fruits cultivar: BGV007863 NEB NA NA
Solanum pimpinellifolium SRX3793095 SRP135718 4084 Fruits cultivar: BGV006370 NEB NA NA
NA SRX3793090 SRP135718 195583 Fruits cultivar: BGV007990 NEB NA NA
Solanum lycopersicum SRX3793091 SRP135718 4081 Fruits cultivar: BGV007863 NEB NA NA
NA SRX3793098 SRP135718 195583 Fruits cultivar: BGV005895 NEB NA NA
Homo sapiens SRX6092740 SRP201819 9606 hepatoblastoma tissue: hepatoblastoma Bioo NA NA
Caenorhabditis elegans SRX9904356 SRP302585 6239 Young adult animals genotype: kstEx22 [21ur-1224 anti-him-8 + Pmyo-2::mCherry + Prps-27::hygromycinR] adapter_trimmed NA rna-seq method: Ligation-based sRNA-seq, 5-linker ligation is independent of the 5-mono phosphate of the small RNAs
Caenorhabditis elegans SRX9904353 SRP302585 6239 Young adult animals genotype: kstEx19 [21ur-1224 anti-him-5 + Pmyo-2::mCherry + Prps-27::hygromycinR] other NA rna-seq method: Ligation-based sRNA-seq, 5-linker ligation is independent of the 5-mono phosphate of the small RNAs
Caenorhabditis elegans SRX9904352 SRP302585 6239 Young adult animals genotype: kstSi4[Pmex-5::ceGFP::tbb-2; cbr-unc-119(+)] II; unc-119(ed3)III; kstEx30 [21ur-1224 mod_him-5 + 21ur-1224_mod_mCherry + 21ur-1224- anti-ceGFP + 21ur-199 anti-oma-1 + Pmyo-2::mCherry + Prps-27::hygromycinR] other NA rna-seq method: Ligation-based sRNA-seq, 5-linker ligation is independent of the 5-mono phosphate of the small RNAs
Caenorhabditis elegans SRX9904350 SRP302585 6239 Young adult animals genotype: kstSi4[Pmex-5::ceGFP::tbb-2; cbr-unc-119(+)] II; unc-119(ed3)III; kstEx28 [21ur-199 anti-random DNA + Pmyo-2::mCherry + Prps-27::hygromycinR] adapter_trimmed NA rna-seq method: Ligation-based sRNA-seq, 5-linker ligation is independent of the 5-mono phosphate of the small RNAs
Homo sapiens SRX6092747 SRP201819 9606 adjacent normal liver tissue tissue: adjacent normal liver tissue Illumina NA NA
Homo sapiens SRX6092748 SRP201819 9606 hepatoblastoma tissue: hepatoblastoma Illumina NA NA
Homo sapiens SRX6092745 SRP201819 9606 adjacent normal liver tissue tissue: adjacent normal liver tissue Illumina NA NA
Homo sapiens SRX6092746 SRP201819 9606 hepatoblastoma tissue: hepatoblastoma Illumina NA NA
Homo sapiens SRX6092743 SRP201819 9606 adjacent normal liver tissue tissue: adjacent normal liver tissue Illumina NA NA
Caenorhabditis elegans SRX9904359 SRP302585 6239 Young adult animals genotype: kstSi4[Pmex-5::ceGFP::tbb-2; cbr-unc-119(+)] II; unc-119(ed3)III; kstEx30 [21ur-1224 mod_him-5 + 21ur-1224_mod_mCherry + 21ur-1224- anti-ceGFP + 21ur-199 anti-oma-1 + Pmyo-2::mCherry + Prps-27::hygromycinR] other NA rna-seq method: Ligation-based sRNA-seq, 5-linker ligation is dependent of the 5-mono phosphate of the small RNAs
Homo sapiens SRX6092744 SRP201819 9606 hepatoblastoma tissue: hepatoblastoma Illumina NA NA