miSRA: search preprocessed public small-RNA data against your reference sequences (miRNA, tRNA, etc)
ugr
miSRAdb automatic annotations
Experiments, taxonID and sample tag are searchable fields
Name Exp Study TaxonID SampleTag SampleTag2 LibraryInf Disease Method
Mus musculus SRX5260750 SRP180144 10090 Leydig cells cell subtype: Primary isolated cells adapter_trimmed NA NA
Mus musculus SRX5260751 SRP180144 10090 Germ cells cell subtype: Primary isolated cells adapter_trimmed NA NA
Danio rerio SRX970012 SRP056603 7955 whole phenotype: normal morphology Illumina NA NA
Caenorhabditis elegans SRX4456462 SRP145812 6239 whole animal tissue: whole animal adapter_trimmed NA NA
Caenorhabditis elegans SRX4456463 SRP145812 6239 whole animal tissue: whole animal adapter_trimmed NA NA
Caenorhabditis elegans SRX4456460 SRP145812 6239 whole animal tissue: whole animal adapter_trimmed NA NA
Caenorhabditis elegans SRX4456461 SRP145812 6239 whole animal tissue: whole animal adapter_trimmed NA NA
Gasterosteus aculeatus SRX4554957 SRP157992 69293 Ovary tissue: Ovary Illumina NA NA
Gasterosteus aculeatus SRX4554958 SRP157992 69293 Brain tissue: Brain Illumina NA NA
Gasterosteus aculeatus SRX4554955 SRP157992 69293 Testis tissue: Testis Illumina NA NA
Gasterosteus aculeatus SRX4554956 SRP157992 69293 Ovary tissue: Ovary Illumina NA NA
Arabidopsis thaliana SRX1388331 SRP065333 3702 seedlings molecule subtype: Small RNA Illumina_2 NA NA
Caenorhabditis elegans SRX4456464 SRP145812 6239 whole animal tissue: whole animal adapter_trimmed NA NA
Gasterosteus aculeatus SRX4554959 SRP157992 69293 Ovary tissue: Ovary Illumina NA NA
Arabidopsis thaliana SRX1388330 SRP065333 3702 seedlings molecule subtype: Small RNA Illumina_2 NA NA
Homo sapiens SRX17705304 SRP399587 9606 Large intestine; Colon cell line: HCT116 other Carcinoma; Colorectal NA
Homo sapiens SRX17705305 SRP399587 9606 Large intestine; Colon cell line: HCT116 other Carcinoma; Colorectal NA
Homo sapiens SRX17705302 SRP399587 9606 Large intestine; Colon cell line: HCT116 other Carcinoma; Colorectal NA
Mus musculus SRX5260749 SRP180144 10090 Leydig cells cell subtype: Primary isolated cells adapter_trimmed NA NA
Homo sapiens SRX17705303 SRP399587 9606 Large intestine; Colon cell line: HCT116 other Carcinoma; Colorectal NA
Homo sapiens SRX17705308 SRP399587 9606 Large intestine; Colon cell line: HCT116 other Carcinoma; Colorectal NA
Mus musculus SRX5260747 SRP180144 10090 Sertoli cells cell subtype: Primary isolated cells adapter_trimmed NA NA
Homo sapiens SRX17705309 SRP399587 9606 Large intestine; Colon cell line: HCT116 other Carcinoma; Colorectal NA
Mus musculus SRX5260748 SRP180144 10090 Leydig cells cell subtype: Primary isolated cells adapter_trimmed NA NA
Homo sapiens SRX17705306 SRP399587 9606 Large intestine; Colon cell line: HCT116 other Carcinoma; Colorectal NA