miSRA: search preprocessed public small-RNA data against your reference sequences (miRNA, tRNA, etc)
miSRAdb automatic annotations
Experiments, taxonID and sample tag are searchable fields
| Name | Exp | Study | TaxonID | SampleTag | SampleTag2 | LibraryInf | Disease | Method |
|---|---|---|---|---|---|---|---|---|
| Homo sapiens | SRX10500321 | SRP313130 | 9606 | tumor biopsy | tissue: tumor biopsy | NEB | ALCL patient | NA |
| Nippostrongylus brasiliensis | SRX9595479 | SRP294443 | 27835 | Whole organism | molecule subtype: small RNA (18-30nt) | Illumina | lentivirus: Empty vector control | NA |
| Homo sapiens | SRX10500326 | SRP313130 | 9606 | tumor biopsy | tissue: tumor biopsy | NEB | ALCL patient | NA |
| Homo sapiens | SRX10500327 | SRP313130 | 9606 | tumor biopsy | tissue: tumor biopsy | NEB | ALCL patient | NA |
| Homo sapiens | SRX10500324 | SRP313130 | 9606 | tumor biopsy | tissue: tumor biopsy | NEB | ALCL patient | NA |
| Homo sapiens | SRX10500325 | SRP313130 | 9606 | tumor biopsy | tissue: tumor biopsy | NEB | ALCL patient | NA |
| Homo sapiens | SRX18385178 | SRP409976 | 9606 | Stool | tissue: Stool | NEB | NA | NA |
| Homo sapiens | SRX18385179 | SRP409976 | 9606 | Stool | tissue: Stool | NEB | NA | NA |
| Homo sapiens | SRX10500328 | SRP313130 | 9606 | tumor biopsy | tissue: tumor biopsy | NEB | ALCL patient | NA |
| Homo sapiens | SRX18385176 | SRP409976 | 9606 | Stool | tissue: Stool | NEB | NA | NA |
| Homo sapiens | SRX10500329 | SRP313130 | 9606 | tumor biopsy | tissue: tumor biopsy | NEB | ALCL patient | NA |
| Homo sapiens | SRX18385177 | SRP409976 | 9606 | Stool | tissue: Stool | NEB | NA | NA |
| Solanum lycopersicum | ERX1066774 | ERP011644 | 4081 | NA | INSDC status: public | adapter_trimmed | NA | NA |
| Rattus norvegicus | SRX1590068 | SRP070453 | 10116 | Hippocampus | tissue: Hippocampus | Illumina | NA | NA |
| Solanum lycopersicum | ERX1066775 | ERP011644 | 4081 | NA | INSDC status: public | adapter_trimmed | NA | NA |
| Rattus norvegicus | SRX1590069 | SRP070453 | 10116 | Adrenal | tissue: Adrenal | Illumina | NA | NA |
| Solanum lycopersicum | ERX1066772 | ERP011644 | 4081 | NA | INSDC status: public | adapter_trimmed | NA | NA |
| Rattus norvegicus | SRX1590066 | SRP070453 | 10116 | Ileum | tissue: Ileum | Illumina | NA | NA |
| Solanum lycopersicum | ERX1066773 | ERP011644 | 4081 | NA | INSDC status: public | adapter_trimmed | NA | NA |
| Rattus norvegicus | SRX1590067 | SRP070453 | 10116 | Duodenum | tissue: Duodenum | Illumina | NA | NA |
| Rattus norvegicus | SRX1590064 | SRP070453 | 10116 | DRG | tissue: DRG | Illumina | NA | NA |
| Rattus norvegicus | SRX1590065 | SRP070453 | 10116 | Medulla | tissue: Medulla | Illumina | NA | NA |
| Solanum lycopersicum | ERX1066776 | ERP011644 | 4081 | NA | INSDC status: public | adapter_trimmed | NA | NA |
| Rattus norvegicus | SRX1590062 | SRP070453 | 10116 | Medulla | tissue: Medulla | Illumina | NA | NA |
| Solanum lycopersicum | ERX1066777 | ERP011644 | 4081 | NA | INSDC status: public | adapter_trimmed | NA | NA |