| Homo sapiens |
SRX18385166 |
SRP409976 |
9606 |
Stool |
tissue: Stool |
NEB |
NA |
NA |
| Homo sapiens |
SRX18385185 |
SRP409976 |
9606 |
Stool |
tissue: Stool |
NEB |
NA |
NA |
| Homo sapiens |
SRX18385186 |
SRP409976 |
9606 |
Stool |
tissue: Stool |
NEB |
NA |
NA |
| Homo sapiens |
SRX18385183 |
SRP409976 |
9606 |
Stool |
tissue: Stool |
NEB |
NA |
NA |
| Homo sapiens |
SRX18385184 |
SRP409976 |
9606 |
Stool |
tissue: Stool |
NEB |
NA |
NA |
| Homo sapiens |
SRX18385181 |
SRP409976 |
9606 |
Stool |
tissue: Stool |
NEB |
NA |
NA |
| Homo sapiens |
SRX18385180 |
SRP409976 |
9606 |
Stool |
tissue: Stool |
NEB |
NA |
NA |
| Homo sapiens |
SRX3220965 |
SRP118983 |
9606 |
SKIN |
karyotype: It is a hypotriploid with a modal number of 62 chromosomes. There are 9 marker chromosomes that are commonly found in each cell, and normal N2, N6, and N22 are present at one copy per cell |
Qiagen_UMI |
MALIGNANT MELANOMA |
NA |
| Homo sapiens |
SRX3220966 |
SRP118983 |
9606 |
BRAIN |
karyotype: This is a human cell line with hyperpentaploid chromosome count. The modal chromosome number should be around 128 to 132. The rate of cells with higher ploidies was 1.39%. Fourteen to 16 marker chromosomes were common to most cells. They were: der(1)t(1;?) (p36;?), i(6p), der(10)t(10;?) (q24;?), der (19)t(19;?) (q13;?), der(15)t(15;?) (q26?;?), minute metacentric and eight to ten others. Most of these structurally altered markers had complex interchromosomal exchanges. The der(10) and der(19) could be formed from a balanced translocation, i.e., t(10;19) (q24;q13). These two markers and the minute metacentric were present in three or more copies in most cells. There were six or more copies for N5, N7, N11, N13, N20, N21, and N22 in most cells. The X and N15 had only one copy |
Qiagen_UMI |
GLIOBLASTOMA MULTIFORME |
NA |
| Nippostrongylus brasiliensis |
SRX9595480 |
SRP294443 |
27835 |
Whole organism |
molecule subtype: small RNA (18-30nt) |
Illumina |
lentivirus: shRNAmir in 3UTR of mcherry |
NA |
| Homo sapiens |
SRX3220963 |
SRP118983 |
9606 |
BRAIN |
karyotype: This is a human cell line with hyperpentaploid chromosome count. The modal chromosome number should be around 128 to 132. The rate of cells with higher ploidies was 1.39%. Fourteen to 16 marker chromosomes were common to most cells. They were: der(1)t(1;?) (p36;?), i(6p), der(10)t(10;?) (q24;?), der (19)t(19;?) (q13;?), der(15)t(15;?) (q26?;?), minute metacentric and eight to ten others. Most of these structurally altered markers had complex interchromosomal exchanges. The der(10) and der(19) could be formed from a balanced translocation, i.e., t(10;19) (q24;q13). These two markers and the minute metacentric were present in three or more copies in most cells. There were six or more copies for N5, N7, N11, N13, N20, N21, and N22 in most cells. The X and N15 had only one copy |
Qiagen_UMI |
GLIOBLASTOMA MULTIFORME |
NA |
| Homo sapiens |
SRX3220964 |
SRP118983 |
9606 |
BRAIN |
karyotype: This is a human cell line with hyperpentaploid chromosome count. The modal chromosome number should be around 128 to 132. The rate of cells with higher ploidies was 1.39%. Fourteen to 16 marker chromosomes were common to most cells. They were: der(1)t(1;?) (p36;?), i(6p), der(10)t(10;?) (q24;?), der (19)t(19;?) (q13;?), der(15)t(15;?) (q26?;?), minute metacentric and eight to ten others. Most of these structurally altered markers had complex interchromosomal exchanges. The der(10) and der(19) could be formed from a balanced translocation, i.e., t(10;19) (q24;q13). These two markers and the minute metacentric were present in three or more copies in most cells. There were six or more copies for N5, N7, N11, N13, N20, N21, and N22 in most cells. The X and N15 had only one copy |
Qiagen_UMI |
GLIOBLASTOMA MULTIFORME |
NA |
| Homo sapiens |
SRX3220969 |
SRP118983 |
9606 |
PROSTATE |
karyotype: 49,XY,del(1)(p10),+i(1)(q10),der(2)t(2;4)(p13;q31)del(2)(q13q33),der(4)t(2;4)(p13;q31),t(6;14)(q15;q32),+7,+12[5]/50,idem,+3[1] |
Qiagen_UMI |
CARCINOMA |
NA |
| Nippostrongylus brasiliensis |
SRX9595483 |
SRP294443 |
27835 |
Whole organism |
molecule subtype: small RNA (18-30nt) |
Illumina |
lentivirus: long hairpin hybrid |
NA |
| Homo sapiens |
SRX3220967 |
SRP118983 |
9606 |
BRAIN |
karyotype: This is a human cell line with hyperpentaploid chromosome count. The modal chromosome number should be around 128 to 132. The rate of cells with higher ploidies was 1.39%. Fourteen to 16 marker chromosomes were common to most cells. They were: der(1)t(1;?) (p36;?), i(6p), der(10)t(10;?) (q24;?), der (19)t(19;?) (q13;?), der(15)t(15;?) (q26?;?), minute metacentric and eight to ten others. Most of these structurally altered markers had complex interchromosomal exchanges. The der(10) and der(19) could be formed from a balanced translocation, i.e., t(10;19) (q24;q13). These two markers and the minute metacentric were present in three or more copies in most cells. There were six or more copies for N5, N7, N11, N13, N20, N21, and N22 in most cells. The X and N15 had only one copy |
Qiagen_UMI |
GLIOBLASTOMA MULTIFORME |
NA |
| Nippostrongylus brasiliensis |
SRX9595481 |
SRP294443 |
27835 |
Whole organism |
molecule subtype: small RNA (18-30nt) |
Illumina |
lentivirus: shot hairpin |
NA |
| Homo sapiens |
SRX3220968 |
SRP118983 |
9606 |
PROSTATE |
karyotype: 49,XY,del(1)(p10),+i(1)(q10),der(2)t(2;4)(p13;q31)del(2)(q13q33),der(4)t(2;4)(p13;q31),t(6;14)(q15;q32),+7,+12[5]/50,idem,+3[1] |
Qiagen_UMI |
CARCINOMA |
NA |
| Nippostrongylus brasiliensis |
SRX9595482 |
SRP294443 |
27835 |
Whole organism |
molecule subtype: small RNA (18-30nt) |
Illumina |
lentivirus: long hairpin |
NA |
| Homo sapiens |
SRX10500322 |
SRP313130 |
9606 |
tumor biopsy |
tissue: tumor biopsy |
NEB |
ALCL patient |
NA |
| Homo sapiens |
SRX10500323 |
SRP313130 |
9606 |
tumor biopsy |
tissue: tumor biopsy |
NEB |
ALCL patient |
NA |
| Homo sapiens |
SRX3220973 |
SRP118983 |
9606 |
COLON |
karyotype: The stemline chromosome number is hypotriploid and 11-12 marker chromosomes were common. Both double minutes and dicentrics were observed in 8% of each metaphase examined |
Qiagen_UMI |
ADENOCARCINOMA |
NA |
| Mus musculus |
SRX367479 |
SRP031888 |
10090 |
NA |
NA |
Illumina_2 |
NA |
NA |
| Homo sapiens |
SRX10500320 |
SRP313130 |
9606 |
tumor biopsy |
tissue: tumor biopsy |
NEB |
ALCL patient |
NA |
| Homo sapiens |
SRX3220970 |
SRP118983 |
9606 |
PROSTATE |
karyotype: At passage 32, a majority of the cells were in the diploid range (45-51) with two main populations: 45, X,-Y and 51, XY |
Qiagen_UMI |
NORMAL |
NA |
| Nippostrongylus brasiliensis |
SRX9595478 |
SRP294443 |
27835 |
Whole organism |
molecule subtype: small RNA (18-30nt) |
Illumina |
lentivirus: None |
NA |
