miSRA: search preprocessed public small-RNA data against your reference sequences (miRNA, tRNA, etc)
ugr
miSRAdb automatic annotations
Experiments, taxonID and sample tag are searchable fields
Name Exp Study TaxonID SampleTag SampleTag2 LibraryInf Disease Method
Rattus norvegicus SRX1590209 SRP070453 10116 Muscle - Biceps tissue: Muscle - Biceps Illumina NA NA
Rattus norvegicus SRX1590206 SRP070453 10116 Medulla tissue: Medulla Illumina NA NA
Rattus norvegicus SRX1590207 SRP070453 10116 Muscle - Biceps tissue: Muscle - Biceps Illumina NA NA
Rattus norvegicus SRX1590204 SRP070453 10116 Ovary tissue: Ovary Illumina NA NA
Rattus norvegicus SRX1590205 SRP070453 10116 DRG tissue: DRG Illumina NA NA
Rattus norvegicus SRX1590202 SRP070453 10116 Cerebellum tissue: Cerebellum Illumina NA NA
Rattus norvegicus SRX1590203 SRP070453 10116 WholeBlood tissue: WholeBlood Illumina NA NA
Homo sapiens SRX18385196 SRP409976 9606 Stool tissue: Stool NEB NA NA
Homo sapiens SRX18385197 SRP409976 9606 Stool tissue: Stool NEB NA NA
Homo sapiens SRX18385194 SRP409976 9606 Stool tissue: Stool NEB NA NA
Homo sapiens SRX18385195 SRP409976 9606 Stool tissue: Stool NEB NA NA
Homo sapiens SRX18385192 SRP409976 9606 Stool tissue: Stool NEB NA NA
Homo sapiens SRX18385193 SRP409976 9606 Stool tissue: Stool NEB NA NA
Homo sapiens SRX18385190 SRP409976 9606 Stool tissue: Stool NEB NA NA
Homo sapiens SRX18385191 SRP409976 9606 Stool tissue: Stool NEB NA NA
Homo sapiens SRX3220955 SRP118983 9606 COLON karyotype: modal number = 50; range = 45 to 53 The stemline chromosome number is hyperdiploid with the 2S component occurring at 12% and 11 marker chromosomes were common to S metaphases. One of the 11 markers [7 (7p; 11p)] was disomic., M1 was probably an HSR but the origin of the chromosome could not be identified Qiagen_UMI ADENOCARCINOMA NA
Homo sapiens SRX3220958 SRP118983 9606 COLON karyotype: modal number = 50; range = 45 to 53 The stemline chromosome number is hyperdiploid with the 2S component occurring at 12% and 11 marker chromosomes were common to S metaphases. One of the 11 markers [7 (7p; 11p)] was disomic., M1 was probably an HSR but the origin of the chromosome could not be identified Qiagen_UMI ADENOCARCINOMA NA
Homo sapiens SRX3220959 SRP118983 9606 COLON karyotype: modal number = 50; range = 45 to 53 The stemline chromosome number is hyperdiploid with the 2S component occurring at 12% and 11 marker chromosomes were common to S metaphases. One of the 11 markers [7 (7p; 11p)] was disomic., M1 was probably an HSR but the origin of the chromosome could not be identified Qiagen_UMI ADENOCARCINOMA NA
Homo sapiens SRX3220956 SRP118983 9606 COLON karyotype: modal number = 50; range = 45 to 53 The stemline chromosome number is hyperdiploid with the 2S component occurring at 12% and 11 marker chromosomes were common to S metaphases. One of the 11 markers [7 (7p; 11p)] was disomic., M1 was probably an HSR but the origin of the chromosome could not be identified Qiagen_UMI ADENOCARCINOMA NA
Homo sapiens SRX3220957 SRP118983 9606 COLON karyotype: modal number = 50; range = 45 to 53 The stemline chromosome number is hyperdiploid with the 2S component occurring at 12% and 11 marker chromosomes were common to S metaphases. One of the 11 markers [7 (7p; 11p)] was disomic., M1 was probably an HSR but the origin of the chromosome could not be identified Qiagen_UMI ADENOCARCINOMA NA
Mus musculus SRX367448 SRP031888 10090 NA NA Illumina NA NA
Homo sapiens SRX3220961 SRP118983 9606 BRAIN karyotype: This is a human cell line with hyperpentaploid chromosome count. The modal chromosome number should be around 128 to 132. The rate of cells with higher ploidies was 1.39%. Fourteen to 16 marker chromosomes were common to most cells. They were: der(1)t(1;?) (p36;?), i(6p), der(10)t(10;?) (q24;?), der (19)t(19;?) (q13;?), der(15)t(15;?) (q26?;?), minute metacentric and eight to ten others. Most of these structurally altered markers had complex interchromosomal exchanges. The der(10) and der(19) could be formed from a balanced translocation, i.e., t(10;19) (q24;q13). These two markers and the minute metacentric were present in three or more copies in most cells. There were six or more copies for N5, N7, N11, N13, N20, N21, and N22 in most cells. The X and N15 had only one copy Qiagen_UMI GLIOBLASTOMA MULTIFORME NA
Homo sapiens SRX3220962 SRP118983 9606 BRAIN karyotype: This is a human cell line with hyperpentaploid chromosome count. The modal chromosome number should be around 128 to 132. The rate of cells with higher ploidies was 1.39%. Fourteen to 16 marker chromosomes were common to most cells. They were: der(1)t(1;?) (p36;?), i(6p), der(10)t(10;?) (q24;?), der (19)t(19;?) (q13;?), der(15)t(15;?) (q26?;?), minute metacentric and eight to ten others. Most of these structurally altered markers had complex interchromosomal exchanges. The der(10) and der(19) could be formed from a balanced translocation, i.e., t(10;19) (q24;q13). These two markers and the minute metacentric were present in three or more copies in most cells. There were six or more copies for N5, N7, N11, N13, N20, N21, and N22 in most cells. The X and N15 had only one copy Qiagen_UMI GLIOBLASTOMA MULTIFORME NA
Homo sapiens SRX3220960 SRP118983 9606 BRAIN karyotype: This is a human cell line with hyperpentaploid chromosome count. The modal chromosome number should be around 128 to 132. The rate of cells with higher ploidies was 1.39%. Fourteen to 16 marker chromosomes were common to most cells. They were: der(1)t(1;?) (p36;?), i(6p), der(10)t(10;?) (q24;?), der (19)t(19;?) (q13;?), der(15)t(15;?) (q26?;?), minute metacentric and eight to ten others. Most of these structurally altered markers had complex interchromosomal exchanges. The der(10) and der(19) could be formed from a balanced translocation, i.e., t(10;19) (q24;q13). These two markers and the minute metacentric were present in three or more copies in most cells. There were six or more copies for N5, N7, N11, N13, N20, N21, and N22 in most cells. The X and N15 had only one copy Qiagen_UMI GLIOBLASTOMA MULTIFORME NA
Mus musculus SRX367444 SRP031888 10090 NA NA Illumina_2 NA NA