miSRA: search preprocessed public small-RNA data against your reference sequences (miRNA, tRNA, etc)
ugr
miSRAdb automatic annotations
Experiments, taxonID and sample tag are searchable fields
Name Exp Study TaxonID SampleTag SampleTag2 LibraryInf Disease Method
Homo sapiens SRX2612122 SRP101361 9606 HEK293 (Flp-In T-REx) cell line: HEK293 (Flp-In T-REx) other NA TCGTATGCCGTCTTCTGCTTG. The recovered RNA was carried through a cDNA library preparation protocol as described previously (Garzia et al. 2016).: GSM2521598
Homo sapiens SRX3674822 SRP132519 9606 blood plasma NA other NA sequencing replicate: B
Homo sapiens SRX2612121 SRP101361 9606 HEK293 (Flp-In T-REx) cell line: HEK293 (Flp-In T-REx) Illumina_2 NA TCGTATGCCGTCTTCTGCTTG. The recovered RNA was carried through a cDNA library preparation protocol as described previously (Garzia et al. 2016).: GSM2521597
Homo sapiens SRX3674821 SRP132519 9606 blood plasma NA other NA sequencing replicate: A
Homo sapiens SRX15302717 SRP375653 9606 iPSC cell line: iPSC adapter_trimmed healthy NA
Homo sapiens SRX15302719 SRP375653 9606 iPSC cell line: iPSC adapter_trimmed healthy NA
Homo sapiens SRX15302718 SRP375653 9606 iPSC cell line: iPSC adapter_trimmed healthy NA
Mus musculus ERX3359900 ERP115388 10090 NA INSDC status: public Illumina NA NA
Homo sapiens SRX114554 SRP010129 9606 Cell line derived from Merkel Cell Carcinoma cell line: Cell line derived from Merkel Cell Carcinoma Illumina_2 NA NA
Mus musculus ERX3359902 ERP115388 10090 NA INSDC status: public Illumina NA NA
Homo sapiens SRX114553 SRP010129 9606 Cell line derived from Merkel Cell Carcinoma cell line: Cell line derived from Merkel Cell Carcinoma Illumina_2 NA NA
Mus musculus ERX3359904 ERP115388 10090 NA INSDC status: public Illumina NA NA
Gobiocypris rarus SRX995493 SRP057175 143606 the brain, heart, liver,stomach tissue: the brain, heart, liver,stomach Illumina NA NA
Homo sapiens SRX114550 SRP010129 9606 Cell line derived from Merkel Cell Carcinoma cell line: Cell line derived from Merkel Cell Carcinoma Illumina_2 NA NA
Homo sapiens SRX114552 SRP010129 9606 Cell line derived from Merkel Cell Carcinoma cell line: Cell line derived from Merkel Cell Carcinoma Illumina_2 NA NA
Homo sapiens SRX114551 SRP010129 9606 Cell line derived from Merkel Cell Carcinoma cell line: Cell line derived from Merkel Cell Carcinoma Illumina_2 NA NA
Mus musculus SRX3924189 SRP139585 10090 sperm treatment: no treatment Illumina NA NA
Mus musculus SRX3924188 SRP139585 10090 sperm treatment: PNK Illumina NA NA
Mus musculus SRX3924185 SRP139585 10090 sperm treatment: no treatment Illumina NA NA
Mus musculus SRX3924184 SRP139585 10090 sperm treatment: PNK Illumina NA NA
Mus musculus SRX3924187 SRP139585 10090 sperm treatment: no treatment Illumina NA NA
Mus musculus SRX3924186 SRP139585 10090 sperm treatment: PNK Illumina NA NA
Mus musculus SRX3924181 SRP139585 10090 sperm treatment: no treatment Illumina NA NA
Caenorhabditis elegans SRX501871 SRP040624 6239 whole worm genotype: prg-1 mutant Illumina_2 NA NA
Mus musculus SRX3924180 SRP139585 10090 testis treatment: base, RPPH Illumina NA NA