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miSRA: search preprocessed public small-RNA data against your reference sequences (miRNA, tRNA, etc)
ugr
miSRAdb automatic annotations
Experiments, taxonID and sample tag are searchable fields
Name Exp Study TaxonID SampleTag SampleTag2 LibraryInf Disease Method
Arabidopsis thaliana SRX18942217 SRP415429 3702 leaves genotype: WT Bioo NA growth_protocol: soil, temp 22C, long day
Homo sapiens SRX1005610 SRP057590 9606 H9 cell line: H9 Illumina NA protocol: H9 cells were expanded and maintained to gamma-irradiated mouse fibroblasts in DMEM/F12, 20%KSR, 0.05 mM 2-merkaptoethanom, 0.5% Pen/Strep, 0.5% glutamine and 10ng/ml bFGF. Cells were passaged once weeksly with 0.5mM EDTA.
Homo sapiens SRX13298031 SRP349078 9606 blood tissue: blood NEB NA NA
Arabidopsis thaliana SRX18942216 SRP415429 3702 leaves genotype: pABI3:DKC1 line 10 in SALK_031065 background Bioo NA growth_protocol: soil, temp 22C, long day
Homo sapiens SRX1005613 SRP057590 9606 H9 cell line: H9 Illumina NA protocol: H9 cells were expanded and maintained to gamma-irradiated mouse fibroblasts in DMEM/F12, 20%KSR, 0.05 mM 2-merkaptoethanom, 0.5% Pen/Strep, 0.5% glutamine and 10ng/ml bFGF. Cells were passaged once weeksly with 0.5mM EDTA.
Homo sapiens SRX13298034 SRP349078 9606 blood tissue: blood NEB NA NA
Homo sapiens SRX16694651 SRP388400 9606 skeletal muscle tissue: skeletal muscle Bioo NA NA
Arabidopsis thaliana SRX18942219 SRP415429 3702 leaves genotype: WT Bioo NA growth_protocol: soil, temp 22C, long day
Homo sapiens SRX1005612 SRP057590 9606 H9 cell line: H9 Illumina NA protocol: H9 cells were expanded and maintained to gamma-irradiated mouse fibroblasts in DMEM/F12, 20%KSR, 0.05 mM 2-merkaptoethanom, 0.5% Pen/Strep, 0.5% glutamine and 10ng/ml bFGF. Cells were passaged once weeksly with 0.5mM EDTA.
Homo sapiens SRX13298033 SRP349078 9606 blood tissue: blood NEB NA NA
Homo sapiens SRX16694650 SRP388400 9606 skeletal muscle tissue: skeletal muscle Bioo NA NA
Arabidopsis thaliana SRX18942218 SRP415429 3702 leaves genotype: WT Bioo NA growth_protocol: soil, temp 22C, long day
Homo sapiens SRX1005615 SRP057590 9606 H9 cell line: H9 Illumina NA protocol: H9 cells were differentiated towards a forebrain fate according to the protocol in Kirkeby et al 2012, Frontiers in Cellular Neuroscience.
Homo sapiens SRX13298036 SRP349078 9606 blood tissue: blood NEB NA NA
Homo sapiens SRX1005614 SRP057590 9606 H9 cell line: H9 Illumina NA protocol: H9 cells were differentiated towards a forebrain fate according to the protocol in Kirkeby et al 2012, Frontiers in Cellular Neuroscience.
Homo sapiens SRX13298035 SRP349078 9606 blood tissue: blood NEB NA NA
Homo sapiens SRX1005617 SRP057590 9606 H9 cell line: H9 Illumina NA protocol: H9 cells were differentiated towards a forebrain fate according to the protocol in Kirkeby et al 2012, Frontiers in Cellular Neuroscience.
Homo sapiens SRX13298038 SRP349078 9606 blood tissue: blood NEB NA NA
Homo sapiens SRX1005616 SRP057590 9606 H9 cell line: H9 Illumina NA protocol: H9 cells were differentiated towards a forebrain fate according to the protocol in Kirkeby et al 2012, Frontiers in Cellular Neuroscience.
Homo sapiens SRX13298037 SRP349078 9606 blood tissue: blood NEB NA NA
Homo sapiens SRX13298030 SRP349078 9606 blood tissue: blood NEB NA NA
Homo sapiens SRX1005608 SRP057590 9606 Lung fibroblast cell type: Lung fibroblast Illumina NA protocol: Human Fetal Lung Fibroblasts (hFL1s) were purchased from American Type Culture Collection (ATCC). Passage 12 – 16 hFL1s were expanded in DMEM supplemented with 10% FBS, 0.5% Pen/Strep, 0.5% glutamine.
Homo sapiens SRX13298029 SRP349078 9606 blood tissue: blood NEB NA NA
Arabidopsis thaliana SRX18942220 SRP415429 3702 leaves genotype: pABI3:DKC1 line 7 in SALK_031065 background Bioo NA growth_protocol: soil, temp 22C, long day
Homo sapiens SRX1005607 SRP057590 9606 Lung fibroblast cell type: Lung fibroblast Illumina NA protocol: Human Fetal Lung Fibroblasts (hFL1s) were purchased from American Type Culture Collection (ATCC). Passage 12 – 16 hFL1s were expanded in DMEM supplemented with 10% FBS, 0.5% Pen/Strep, 0.5% glutamine.