miSRA: search preprocessed public small-RNA data against your reference sequences (miRNA, tRNA, etc)
ugr
miSRAdb automatic annotations
Experiments, taxonID and sample tag are searchable fields
Name Exp Study TaxonID SampleTag SampleTag2 LibraryInf Disease Method
Arabidopsis thaliana SRX5213678 SRP176450 3702 NA NA Illumina NA NA
Caenorhabditis elegans SRX4394672 SRP153922 6239 Adult worms treatment protocol: Nematodes were harvested from the plates and flash frozen. Illumina NA treatment protocol: Nematodes were harvested from the plates and flash frozen.
Arabidopsis thaliana SRX5213677 SRP176450 3702 NA NA Illumina NA NA
Homo sapiens SRX17618260 SRP369842 9606 liver tissue: liver adapter_trimmed NA NA
Mus musculus SRX8734842 SRP271989 10090 supernatants tissue: supernatants NEB NA NA
Arabidopsis thaliana SRX5213670 SRP176450 3702 inflorescence genotype: DMS3-ZF_in_fwa_x_nrpd1 Illumina NA NA
Mus musculus SRX8734844 SRP271989 10090 supernatants tissue: supernatants NEB NA NA
Mus musculus SRX8734843 SRP271989 10090 supernatants tissue: supernatants NEB NA NA
Homo sapiens SRX17618256 SRP369842 9606 liver tissue: liver adapter_trimmed NA NA
Homo sapiens SRX17618255 SRP369842 9606 liver tissue: liver adapter_trimmed NA NA
Mus musculus SRX8734845 SRP271989 10090 supernatants tissue: supernatants NEB NA NA
Homo sapiens SRX17618258 SRP369842 9606 liver tissue: liver adapter_trimmed NA NA
Homo sapiens SRX17618257 SRP369842 9606 liver tissue: liver adapter_trimmed NA NA
Mus musculus SRX15763808 SRP382170 10090 liver genotype: ApcDHep Qiagen_UMI NA NA
Arabidopsis thaliana SRX5213658 SRP176450 3702 inflorescence genotype: NRPD1-ZF_in_fwa_x_dcl3 Illumina NA NA
Mus musculus SRX15763807 SRP382170 10090 liver genotype: ApcDHep Qiagen_UMI NA NA
Arabidopsis thaliana SRX5213657 SRP176450 3702 inflorescence genotype: NRPD1-ZF_in_fwa Illumina NA NA
Heligmosomoides polygyrus bakeri SRX4394655 SRP153922 375939 Adult worms treatment protocol: Nematodes were disrupted in 700 µl of Qiazol (Qiagen) using mechanical disruption with 5 mm stainless steel beads (Qiagen) on a Tissue Lyser II (30hz for 2 min twice; Qiagen) Illumina NA treatment protocol: Nematodes were disrupted in 700 µl of Qiazol (Qiagen) using mechanical disruption with 5 mm stainless steel beads (Qiagen) on a Tissue Lyser II (30hz for 2 min twice; Qiagen)
Mus musculus SRX15763809 SRP382170 10090 liver genotype: ApcDHep Qiagen_UMI NA NA
Heligmosomoides polygyrus bakeri SRX4394654 SRP153922 375939 Adult worms treatment protocol: Nematodes were disrupted in 700 µl of Qiazol (Qiagen) using mechanical disruption with 5 mm stainless steel beads (Qiagen) on a Tissue Lyser II (30hz for 2 min twice; Qiagen) Illumina NA treatment protocol: Nematodes were disrupted in 700 µl of Qiazol (Qiagen) using mechanical disruption with 5 mm stainless steel beads (Qiagen) on a Tissue Lyser II (30hz for 2 min twice; Qiagen)
Arabidopsis thaliana SRX5213659 SRP176450 3702 inflorescence genotype: NRPD1-ZF_in_fwa_x_dcl3 adapter_trimmed NA NA
Heligmosomoides polygyrus bakeri SRX4394657 SRP153922 375939 Adult worms treatment protocol: Nematodes were disrupted in 700 µl of Qiazol (Qiagen) using mechanical disruption with 5 mm stainless steel beads (Qiagen) on a Tissue Lyser II (30hz for 2 min twice; Qiagen) Illumina NA treatment protocol: Nematodes were disrupted in 700 µl of Qiazol (Qiagen) using mechanical disruption with 5 mm stainless steel beads (Qiagen) on a Tissue Lyser II (30hz for 2 min twice; Qiagen)
Homo sapiens SRX17618259 SRP369842 9606 liver tissue: liver adapter_trimmed NA NA
Heligmosomoides polygyrus bakeri SRX4394656 SRP153922 375939 Adult worms treatment protocol: Nematodes were disrupted in 700 µl of Qiazol (Qiagen) using mechanical disruption with 5 mm stainless steel beads (Qiagen) on a Tissue Lyser II (30hz for 2 min twice; Qiagen) Illumina NA treatment protocol: Nematodes were disrupted in 700 µl of Qiazol (Qiagen) using mechanical disruption with 5 mm stainless steel beads (Qiagen) on a Tissue Lyser II (30hz for 2 min twice; Qiagen)
Heligmosomoides polygyrus bakeri SRX4394659 SRP153922 375939 Adult worms treatment protocol: Nematodes were disrupted in 700 µl of Qiazol (Qiagen) using mechanical disruption with 5 mm stainless steel beads (Qiagen) on a Tissue Lyser II (30hz for 2 min twice; Qiagen) Illumina NA treatment protocol: Nematodes were disrupted in 700 µl of Qiazol (Qiagen) using mechanical disruption with 5 mm stainless steel beads (Qiagen) on a Tissue Lyser II (30hz for 2 min twice; Qiagen)