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miSRA: search preprocessed public small-RNA data against your reference sequences (miRNA, tRNA, etc)
ugr
miSRAdb automatic annotations
Experiments, taxonID and sample tag are searchable fields
Name Exp Study TaxonID SampleTag SampleTag2 LibraryInf Disease Method
Arabidopsis thaliana SRX20002914 SRP433241 3702 whole ground plant genotype: hda9-1 Illumina NA growth_protocol: 12-day-old seedlings grown on x Murashige and Skoog (MS) media containing 1% (w/v) sucrose, pH 5.7, under a long-day photoperiod (16 h light/8 h dark) at 22C and 100120 mol m2 s1 light intensity.
Arabidopsis thaliana SRX20002915 SRP433241 3702 whole ground plant genotype: hda9-1 Illumina NA growth_protocol: 12-day-old seedlings grown on x Murashige and Skoog (MS) media containing 1% (w/v) sucrose, pH 5.7, under a long-day photoperiod (16 h light/8 h dark) at 22C and 100120 mol m2 s1 light intensity.
Arabidopsis thaliana SRX20002916 SRP433241 3702 whole ground plant genotype: hda9-1 Illumina NA growth_protocol: 12-day-old seedlings grown on x Murashige and Skoog (MS) media containing 1% (w/v) sucrose, pH 5.7, under a long-day photoperiod (16 h light/8 h dark) at 22C and 100120 mol m2 s1 light intensity.
Mus musculus SRX7954900 SRP253375 10090 Plasma NA Qiagen_UMI NA NA
Homo sapiens SRX9775730 SRP300242 9606 MV3 melanoma cells genotype/variation: transfection with empty pcDNA.3 plasmid containing wild type MCPIP1 expression cassette adapter_trimmed NA NA
Penaeus vannamei SRX12102105 SRP336161 6689 hemocyte tissue: hemocyte Illumina NA NA
Arabidopsis thaliana SRX20002910 SRP433241 3702 whole ground plant genotype: Col-0 Illumina NA growth_protocol: 12-day-old seedlings grown on x Murashige and Skoog (MS) media containing 1% (w/v) sucrose, pH 5.7, under a long-day photoperiod (16 h light/8 h dark) at 22C and 100120 mol m2 s1 light intensity.
Penaeus vannamei SRX12102106 SRP336161 6689 hemocyte tissue: hemocyte Illumina NA NA
Arabidopsis thaliana SRX20002911 SRP433241 3702 whole ground plant genotype: Col-0 Illumina NA growth_protocol: 12-day-old seedlings grown on x Murashige and Skoog (MS) media containing 1% (w/v) sucrose, pH 5.7, under a long-day photoperiod (16 h light/8 h dark) at 22C and 100120 mol m2 s1 light intensity.
Arabidopsis thaliana SRX20002912 SRP433241 3702 whole ground plant genotype: hyl1-2 Illumina NA growth_protocol: 12-day-old seedlings grown on x Murashige and Skoog (MS) media containing 1% (w/v) sucrose, pH 5.7, under a long-day photoperiod (16 h light/8 h dark) at 22C and 100120 mol m2 s1 light intensity.
Arabidopsis thaliana SRX8595022 SRP268298 3702 Early heart embryo genotype: wild type NEB NA NA
Arabidopsis thaliana SRX8595023 SRP268298 3702 Early heart embryo genotype: wild type NEB NA NA
Homo sapiens SRX4123205 SRP148921 9606 293T cell line: 293T NEB NA NA
Homo sapiens SRX4123206 SRP148921 9606 293T cell line: 293T NEB NA NA
Homo sapiens SRX4123207 SRP148921 9606 293T cell line: 293T NEB NA NA
Homo sapiens SRX4123208 SRP148921 9606 293T cell line: 293T NEB NA NA
Homo sapiens SRX10023999 SRP304723 9606 Peripheral blood tissue: Peripheral blood adapter_trimmed Asymptomatic infection NA
Mus musculus SRX22147036 SRP467385 10090 skeletal muscle, quadriceps genotype: C57BL/6J adapter_trimmed NA NA
Mus musculus SRX22147037 SRP467385 10090 skeletal muscle, quadriceps genotype: C57BL/6J adapter_trimmed NA NA
Mus musculus SRX22147038 SRP467385 10090 skeletal muscle, quadriceps genotype: C57BL/6J adapter_trimmed NA NA
Mus musculus SRX22147039 SRP467385 10090 skeletal muscle, quadriceps genotype: C57BL/6J adapter_trimmed NA NA
Arabidopsis thaliana SRX5763740 SRP194124 3702 Flower tissue: Flower Illumina NA NA
Bos taurus SRX5258878 SRP180005 9913 Retina tissue: Retina Illumina NA NA
Arabidopsis thaliana SRX5763741 SRP194124 3702 Flower tissue: Flower Illumina NA NA
Bos taurus SRX5258879 SRP180005 9913 Submandibular Lymph Node tissue: Submandibular Lymph Node Illumina NA NA