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miSRA: search preprocessed public small-RNA data against your reference sequences (miRNA, tRNA, etc)
ugr
miSRAdb automatic annotations
Experiments, taxonID and sample tag are searchable fields
Name Exp Study TaxonID SampleTag SampleTag2 LibraryInf Disease Method
Arabidopsis thaliana SRX20002938 SRP433241 3702 whole ground plant genotype: hos15-2 Illumina NA growth_protocol: 12-day-old seedlings grown on x Murashige and Skoog (MS) media containing 1% (w/v) sucrose, pH 5.7, under a long-day photoperiod (16 h light/8 h dark) at 22C and 100120 mol m2 s1 light intensity.
Mus musculus SRX7954922 SRP253375 10090 Plasma NA Qiagen_UMI NA NA
Homo sapiens SRX10023991 SRP304723 9606 Peripheral blood tissue: Peripheral blood adapter_trimmed Asymptomatic infection NA
Mus musculus SRX7954901 SRP253375 10090 Plasma NA Qiagen_UMI NA NA
Homo sapiens SRX9775731 SRP300242 9606 MV3 melanoma cells genotype/variation: transfection with empty pcDNA.3 plasmid containing wild type MCPIP1 expression cassette adapter_trimmed NA NA
Homo sapiens SRX10023992 SRP304723 9606 Peripheral blood tissue: Peripheral blood adapter_trimmed Asymptomatic infection NA
Mus musculus SRX7954902 SRP253375 10090 Plasma NA Qiagen_UMI NA NA
Homo sapiens SRX9775732 SRP300242 9606 MV3 melanoma cells genotype/variation: transfection with empty pcDNA.3 plasmid containing wild type MCPIP1 expression cassette adapter_trimmed NA NA
Homo sapiens SRX10023993 SRP304723 9606 Peripheral blood tissue: Peripheral blood adapter_trimmed Asymptomatic infection NA
Arabidopsis thaliana SRX20002933 SRP433241 3702 whole ground plant genotype: Col-0 Illumina NA growth_protocol: 12-day-old seedlings grown on x Murashige and Skoog (MS) media containing 1% (w/v) sucrose, pH 5.7, under a long-day photoperiod (16 h light/8 h dark) at 22C and 100120 mol m2 s1 light intensity.
Mus musculus SRX7954903 SRP253375 10090 Plasma NA Qiagen_UMI NA NA
Homo sapiens SRX9775733 SRP300242 9606 MV3 melanoma cells genotype/variation: transfection with empty pcDNA.3 plasmid containing wild type MCPIP1 expression cassette adapter_trimmed NA NA
Homo sapiens SRX10023994 SRP304723 9606 Peripheral blood tissue: Peripheral blood adapter_trimmed Asymptomatic infection NA
Mus musculus SRX7954904 SRP253375 10090 Plasma NA Qiagen_UMI NA NA
Homo sapiens SRX9775734 SRP300242 9606 MV3 melanoma cells genotype/variation: transfection with empty pcDNA.3 plasmid containing mutated MCPIP1 expression cassette adapter_trimmed NA NA
Homo sapiens SRX10023995 SRP304723 9606 Peripheral blood tissue: Peripheral blood adapter_trimmed Asymptomatic infection NA
Mus musculus SRX7954905 SRP253375 10090 Plasma NA Qiagen_UMI NA NA
Homo sapiens SRX9775735 SRP300242 9606 MV3 melanoma cells genotype/variation: transfection with empty pcDNA.3 plasmid containing mutated MCPIP1 expression cassette adapter_trimmed NA NA
Homo sapiens SRX10023996 SRP304723 9606 Peripheral blood tissue: Peripheral blood adapter_trimmed Asymptomatic infection NA
Mus musculus SRX7954906 SRP253375 10090 Plasma NA Qiagen_UMI NA NA
Homo sapiens SRX9775736 SRP300242 9606 MV3 melanoma cells genotype/variation: transfection with empty pcDNA.3 plasmid containing mutated MCPIP1 expression cassette adapter_trimmed NA NA
Homo sapiens SRX10023997 SRP304723 9606 Peripheral blood tissue: Peripheral blood adapter_trimmed Moderate NA
Mus musculus SRX7954907 SRP253375 10090 Plasma NA Qiagen_UMI NA NA
Homo sapiens SRX9775737 SRP300242 9606 MV3 melanoma cells genotype/variation: transfection with empty pcDNA.3 plasmid containing mutated MCPIP1 expression cassette adapter_trimmed NA NA
Homo sapiens SRX10023998 SRP304723 9606 Peripheral blood tissue: Peripheral blood adapter_trimmed Asymptomatic infection NA